RNA–Protein interactions for RNA: ENST00000409406.1

RBM4-205, Transcript of RNA binding motif protein 4, human

APPRIS P1 TSL 2 BASIC

Gene RBM4, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-205	ENST00000409406	SGSM3	Q96HU1	749 aa		13.94	□□□□□ -0.18
RBM4-205	ENST00000409406	MLXIP	Q9HAP2	919 aa		13.94	□□□□□ -0.18
RBM4-205	ENST00000409406	REXO2	Q9Y3B8	237 aa	Known RBP	13.94	□□□□□ -0.18
RBM4-205	ENST00000409406	SLC16A4	O15374	487 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	RPL13	P26373	211 aa	Known RBP	13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	CALR	P27797	417 aa	Known RBP	13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	NPTX2	P47972	431 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	C11orf91	Q3C1V1	193 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	MTERF2	Q49AM1	385 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	FIGN	Q5HY92	759 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	GPR142	Q7Z601	462 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	RETREG2	Q8NC44	543 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	DNAJC7	Q99615	494 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	GPR20	Q99678	358 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	NTPCR	Q9BSD7	190 aa	Known RBP	13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	SLC24A3	Q9HC58	644 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	LUC7L2	Q9Y383	392 aa	Known RBP	13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	PASK	Q96RG2	1323 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	TISP43	B9A030	160 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	TRIM21	P19474	475 aa	Known RBP	13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	STAT5B	P51692	787 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	GRB14	Q14449	540 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	TAPT1	Q6NXT6	567 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	FMNL3	Q8IVF7	1028 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	TMEM161B	Q8NDZ6	487 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	CAGE1	Q8TC20	777 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	ARL8A	Q96BM9	186 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	KIFC3	Q9BVG8	833 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	NUP58	Q9BVL2	599 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	NIFK	Q9BYG3	293 aa	Known RBP	13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	ADGRA2	Q96PE1	1338 aa		13.93	□□□□□ -0.18
RBM4-205	ENST00000409406	SLC16A3	O15427	465 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	ZEB2	O60315	1214 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	TXN	P10599	105 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	C2orf54	Q08AI8	447 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	KCNH2	Q12809	1159 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	ALCAM	Q13740	583 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	TARBP2	Q15633	366 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	RNF187	Q5TA31	235 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	NAA35	Q5VZE5	725 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	WDR59	Q6PJI9	974 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	CCDC13	Q8IYE1	715 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	OR8K1	Q8NGG5	319 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	KIFAP3	Q92845	792 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	KATNBL1	Q9H079	304 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	CENPH	Q9H3R5	247 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	DHX33	Q9H6R0	707 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	SLC40A1	Q9NP59	571 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	ADGRA3	Q8IWK6	1321 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	IBSP	P21815	317 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	NBPF20	Q3BBV1	942 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	NAIF1	Q69YI7	327 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	MAMDC4	Q6UXC1	1216 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	HS2ST1	Q7LGA3	356 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	MCPH1	Q8NEM0	835 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	SLC35C1	Q96A29	364 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	JAKMIP2	Q96AA8	810 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	CHP1	Q99653	195 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	HAUS4	Q9H6D7	363 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	C17orf75	Q9HAS0	396 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	ATP6V0A4	Q9HBG4	840 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	CPA4	Q9UI42	421 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406	IVNS1ABP	Q9Y6Y0	642 aa		13.92	□□□□□ -0.18
RBM4-205	ENST00000409406		A0A1W2PQJ5	194 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	PDE2A	O00408	941 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	LGR5	O75473	907 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	NDUFA10	O95299	355 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	RTP1	P59025	263 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	EMC2	Q15006	297 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	RGMB	Q6NW40	437 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	TRIM50	Q86XT4	487 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	SLC9A9	Q8IVB4	645 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	SYCP3	Q8IZU3	236 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	ZNF473	Q8WTR7	871 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	TMEM174	Q8WUU8	243 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	SPIRE2	Q8WWL2	714 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	ACCS	Q96QU6	501 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	RUFY1	Q96T51	708 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	TMEM206	Q9H813	350 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	MMRN2	Q9H8L6	949 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	DIS3	Q9Y2L1	958 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	CCDC169	A6NNP5	214 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	ECM2	O94769	699 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	NOL4	O94818	638 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	SNAI1	O95863	264 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	CYP2J2	P51589	502 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	IRX1	P78414	480 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	ZBED6	P86452	979 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	DMP1	Q13316	513 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	TTLL4	Q14679	1199 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	GJC2	Q5T442	439 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	CCDC70	Q6NSX1	233 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	TSEN2	Q8NCE0	465 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	SCFD2	Q8WU76	684 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	MKNK1	Q9BUB5	465 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms