RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 FZD8Q9H461 694 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 PARVGQ9HBI0 331 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 LARSQ9P2J5 1176 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 K7ERI5 159 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 ACKR2O00590 384 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 N4BP3O15049 544 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 LINC00271P0C7V0 271 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 CASP1P29466 404 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 NMT1P30419 496 aaKnown RBP11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 AXLP30530 894 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 PBX3P40426 434 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 MLH1P40692 756 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 NCKAP1LP55160 1127 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 FAM189BP81408 668 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 NCBP1Q09161 790 aaKnown RBP11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 STRN3Q13033 797 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 ADGRE1Q14246 886 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 FAM187BQ17R55 369 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 ZNF568Q3ZCX4 644 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 EPC2Q52LR7 807 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 NT5DC1Q5TFE4 455 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 ATF7IP2Q5U623 682 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 AGMOQ6ZNB7 445 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 FAM178BQ8IXR5 827 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 TMEM192Q8IY95 271 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 GRAMD1CQ8IYS0 662 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 FSIP1Q8NA03 581 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 TMEM161BQ8NDZ6 487 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 BICD1Q96G01 975 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 CASD1Q96PB1 797 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 TARS2Q9BW92 718 aaKnown RBP11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 TRAIPQ9BWF2 469 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 C17orf75Q9HAS0 396 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 TBC1D7Q9P0N9 293 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 VWA8A3KMH1 1905 aa11.31□□□□□ -0.6
TSPAN9-202ENST00000407263 TRAK2O60296 914 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 EOMESO95936 686 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 SKIP12755 728 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 ITGA4P13612 1032 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 AKAP5P24588 427 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 MATR3P43243 847 aaKnown RBP eCLIP11.3□□□□□ -0.63e-6■□□□□ 11
TSPAN9-202ENST00000407263 AFMP43652 599 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 ZNF131P52739 623 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 SMTNP53814 917 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 ASIC1P78348 528 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 COASYQ13057 564 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 ADALQ6DHV7 355 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 GLB1LQ6UWU2 654 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 HAUS6Q7Z4H7 955 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 ZBTB33Q86T24 672 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 SPIRE2Q8WWL2 714 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 DNAJC19Q96DA6 116 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 PGBD4Q96DM1 585 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 ZFP42Q96MM3 310 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 ADPGKQ9BRR6 497 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 MRPL4Q9BYD3 311 aaKnown RBP11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 CDT1Q9H211 546 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 BLZF1Q9H2G9 400 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 TNMDQ9H2S6 317 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 GOLPH3LQ9H4A5 285 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 TYW1Q9NV66 732 aaKnown RBP11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 KLK14Q9P0G3 267 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 SERTAD1Q9UHV2 236 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 KCNH3Q9ULD8 1083 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 TSC2P49815 1807 aa11.3□□□□□ -0.6
TSPAN9-202ENST00000407263 PLXNA3P51805 1871 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 A0A1B0GUA9 196 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 ACTN4O43707 911 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 B4GALT3O60512 393 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 ZNF623O75123 536 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 ZC3H11AO75152 810 aaKnown RBP eCLIP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 RECQL4O94761 1208 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 POMCP01189 267 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 SCNN1GP51170 649 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 AFF1P51825 1210 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 NDUFA8P51970 172 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 OSTNP61366 133 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 RNASELQ05823 741 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 GPM6BQ13491 265 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 DCAF4L1Q3SXM0 396 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 ZC2HC1CQ53FD0 456 aaPredicted RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 NOMO2Q5JPE7 1267 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 LRRC55Q6ZSA7 311 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 FAM43BQ6ZT52 329 aaPredicted RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 HACE1Q8IYU2 909 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 CEP57L1Q8IYX8 460 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 CEP120Q8N960 986 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 COLGALT1Q8NBJ5 622 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms