RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 MUTYHQ9UIF7 546 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 IRAK3Q9Y616 596 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 TECTAO75443 2155 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 ARHGEF35A5YM69 484 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 CLASP2O75122 1294 aaKnown RBP17.03■□□□□ 0.32
TPM1-207ENST00000403994 CTSAP10619 480 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 NCBP1Q09161 790 aaKnown RBP17.03■□□□□ 0.32
TPM1-207ENST00000403994 CBX2Q14781 532 aaPredicted RBP17.03■□□□□ 0.32
TPM1-207ENST00000403994 HERC4Q5GLZ8 1057 aaPredicted RBP17.03■□□□□ 0.32
TPM1-207ENST00000403994 SLC27A1Q6PCB7 646 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 PADI6Q6TGC4 694 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 RNF135Q8IUD6 432 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 BSNDQ8WZ55 320 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 CASP10Q92851 521 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 ZFP42Q96MM3 310 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 TMEM175Q9BSA9 504 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 APOL5Q9BWW9 433 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 PHF7Q9BWX1 381 aaPredicted RBP17.03■□□□□ 0.32
TPM1-207ENST00000403994 TRIM6Q9C030 488 aaPredicted RBP17.03■□□□□ 0.32
TPM1-207ENST00000403994 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 UBN1Q9NPG3 1134 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 KANSL3Q9P2N6 904 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 PCDHB6Q9Y5E3 794 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 PLXNA3P51805 1871 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 ZNF318Q5VUA4 2279 aa17.03■□□□□ 0.32
TPM1-207ENST00000403994 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 PRR33A8MZF0 331 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 NPTXRO95502 500 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 HOXB8P17481 243 aaPredicted RBP17.02■□□□□ 0.32
TPM1-207ENST00000403994 MUTP22033 750 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 CCT6AP40227 531 aaKnown RBP17.02■□□□□ 0.32
TPM1-207ENST00000403994 SCNN1GP51170 649 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 DSC1Q08554 894 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 BMS1Q14692 1282 aaKnown RBP17.02■□□□□ 0.32
TPM1-207ENST00000403994 PTPN14Q15678 1187 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 ECM1Q16610 540 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 CDR2LQ86X02 465 aaPredicted RBP17.02■□□□□ 0.32
TPM1-207ENST00000403994 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 PRIMPOLQ96LW4 560 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 FAM193BQ96PV7 902 aaPredicted RBP17.02■□□□□ 0.32
TPM1-207ENST00000403994 GAD1Q99259 594 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 APOL6Q9BWW8 343 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 PRMT7Q9NVM4 692 aaPredicted RBP17.02■□□□□ 0.32
TPM1-207ENST00000403994 MARCH5Q9NX47 278 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 LRWD1Q9UFC0 647 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 CDH22Q9UJ99 828 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 KIF3AQ9Y496 699 aa17.02■□□□□ 0.32
TPM1-207ENST00000403994 C2orf16Q68DN1 1984 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 A0A1B0GUA9 196 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 CXCL14O95715 111 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 CYP11B2P19099 503 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 PTGDRQ13258 359 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 GIT2Q14161 759 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 ZBTB8OSQ8IWT0 167 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 COLGALT2Q8IYK4 626 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 HACE1Q8IYU2 909 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 CCDC113Q9H0I3 377 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 STK39Q9UEW8 545 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 PRG3Q9Y2Y8 225 aaPredicted RBP17.01■□□□□ 0.31
TPM1-207ENST00000403994 HCN4Q9Y3Q4 1203 aa17.01■□□□□ 0.31
TPM1-207ENST00000403994 TTLL13PA6NNM8 815 aa17■□□□□ 0.31
TPM1-207ENST00000403994 NRP1O14786 923 aa17■□□□□ 0.31
TPM1-207ENST00000403994 EPCAMP16422 314 aa17■□□□□ 0.31
TPM1-207ENST00000403994 FAM187BQ17R55 369 aa17■□□□□ 0.31
TPM1-207ENST00000403994 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
TPM1-207ENST00000403994 SNX29Q8TEQ0 813 aa17■□□□□ 0.31
TPM1-207ENST00000403994 RPGRIP1Q96KN7 1286 aa17■□□□□ 0.31
TPM1-207ENST00000403994 C2orf40Q9H1Z8 148 aa17■□□□□ 0.31
TPM1-207ENST00000403994 BHMT2Q9H2M3 363 aa17■□□□□ 0.31
TPM1-207ENST00000403994 PDZD7Q9H5P4 517 aa17■□□□□ 0.31
TPM1-207ENST00000403994 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
TPM1-207ENST00000403994 DDX19AQ9NUU7 478 aaKnown RBP17■□□□□ 0.31
TPM1-207ENST00000403994 DZANK1Q9NVP4 752 aa17■□□□□ 0.31
TPM1-207ENST00000403994 FAN1Q9Y2M0 1017 aa17■□□□□ 0.31
TPM1-207ENST00000403994 GIT1Q9Y2X7 761 aa17■□□□□ 0.31
TPM1-207ENST00000403994 PP2D1A8MPX8 630 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 F8W810 466 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 LAD1O00515 517 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 EDN1P05305 212 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 SSBP05455 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
TPM1-207ENST00000403994 AKAP5P24588 427 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 PRPHP41219 470 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 NAMPTP43490 491 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 GSTCDQ8NEC7 633 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 TBC1D32Q96NH3 1257 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 KIFC3Q9BVG8 833 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 HERC2P3Q9BVR0 1158 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 RAB34Q9BZG1 259 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 FZD8Q9H461 694 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.99■□□□□ 0.31
TPM1-207ENST00000403994 MIOSQ9NXC5 875 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 KIAA1024Q9UPX6 916 aa16.99■□□□□ 0.31
TPM1-207ENST00000403994 ZDBF2Q9HCK1 2354 aa16.98■□□□□ 0.31
TPM1-207ENST00000403994 N4BP3O15049 544 aa16.98■□□□□ 0.31
TPM1-207ENST00000403994 EFEMP2O95967 443 aa16.98■□□□□ 0.31
TPM1-207ENST00000403994 SOD2P04179 222 aa16.98■□□□□ 0.31
TPM1-207ENST00000403994 PRKCBP05771 671 aa16.98■□□□□ 0.31
TPM1-207ENST00000403994 SP100P23497 879 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms