RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 USP17L18D6R9N7 530 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 USP17L22D6RA61 530 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 USP17L17D6RBQ6 530 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 USP17L19D6RCP7 530 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 USP17L20D6RJB6 530 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 ZNF157P51786 506 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 USP17L24Q0WX57 530 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 NR5A1Q13285 461 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 ANKRD40Q6AI12 368 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 UNC13DQ70J99 1090 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 RUBCNLQ9H714 662 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 KRT4P19013 534 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 SKOR1P84550 965 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 B4GALNT2Q8NHY0 566 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 BTN2A2Q8WVV5 523 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 MAP4K1Q92918 833 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 POLR1AO95602 1720 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 SRGAP2O75044 1071 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 NR3C1P04150 777 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 CCNE1P24864 410 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 FAM102AQ5T9C2 384 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 DDIASQ8IXT1 998 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 NUP85Q9BW27 656 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 IFNAR1P17181 557 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 PSMA3P25788 255 aa12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 TDRD3Q9H7E2 651 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-206ENST00000399273 LCP1P13796 627 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 ST13P4Q8IZP2 240 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 LSG1Q9H089 658 aaKnown RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 SLC38A7Q9NVC3 462 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 MIF4GDA9UHW6 222 aaKnown RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 LTKP29376 864 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 TPI1P60174 286 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 OCA2Q04671 838 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 KRT17Q04695 432 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 ADCK2Q7Z695 626 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 CDKL3Q8IVW4 592 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 SPON1Q9HCB6 807 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 MOCS2O96007 188 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 LIFRP42702 1097 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 HAUS6Q7Z4H7 955 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 TRIM48Q8IWZ4 208 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 CNPY4Q8N129 248 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 PARVAQ9NVD7 372 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 PSMD3O43242 534 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 PRKAB2O43741 272 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 EFNA5P52803 228 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 NCALDP61601 193 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 FAM133BQ5BKY9 247 aaKnown RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 SPDYAQ5MJ70 313 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 APPL2Q8NEU8 664 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 AP1M1Q9BXS5 423 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 VPS11Q9H270 941 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 TRAF3IP3Q9Y228 551 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 SUPT3HO75486 399 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 SASH1O94885 1247 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 NBPF20Q3BBV1 942 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 PANX2Q96RD6 677 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 ECT2Q9H8V3 914 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 AFF2P51816 1311 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 DIAPH2O60879 1101 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 FGGP02679 453 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 CACNB3P54284 484 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 SPP2Q13103 211 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 RASA4BC9J798 803 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 RASA4O43374 803 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 HPCAP84074 193 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 DAB2P98082 770 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 OOSP2Q86WS3 158 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 TRIML2Q8N7C3 387 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
CCDC144A-206ENST00000399273 PSMC5P62195 406 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 RASGRF1Q13972 1273 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 TAF1CQ15572 869 aaPredicted RBP12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 NDUFA10O95299 355 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 HIST1H2AGP0C0S8 130 aaPredicted RBP12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 HIST1H2ADP20671 130 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 SYT2Q8N9I0 419 aaPredicted RBP12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 HIST1H2AHQ96KK5 128 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 HIST1H2AJQ99878 128 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 H2AFJQ9BTM1 129 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 MAN1C1Q9NR34 630 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 CCDC188H7C350 402 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 GYG2O15488 501 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 ATP5HO75947 161 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 HMOX2P30519 316 aa12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 FASTKD1Q53R41 847 aaKnown RBP12.28□□□□□ -0.44
CCDC144A-206ENST00000399273 PIGBQ92521 554 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms