RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TRIM49BA6NDI0 452 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 KPNA2P52292 529 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 PYROXD1Q8WU10 500 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 SPON2Q9BUD6 331 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 FAM217BQ9NTX9 383 aaPredicted RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 AFF4Q9UHB7 1163 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 TPX2Q9ULW0 747 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 PCDHA10Q9Y5I2 948 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 HEY1Q9Y5J3 304 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 GRIK1P39086 918 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 ART3Q13508 389 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 ACBD5Q5T8D3 534 aaPredicted RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 C3orf67Q6ZVT6 689 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 MAP3K20Q9NYL2 800 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 INTUQ9ULD6 942 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 ROBO1Q9Y6N7 1651 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 RASA1P20936 1047 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 GCLMP48507 274 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 PPP1R2P3Q6NXS1 205 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 SCFD2Q8WU76 684 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 THOC1Q96FV9 657 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 GOLGA8MH3BSY2 632 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 ACSL3O95573 720 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 EPHB4P54760 987 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 KLC3Q6P597 504 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 LCA5Q86VQ0 697 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 SFR1Q86XK3 245 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 TRIM42Q8IWZ5 723 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 STAG2Q8N3U4 1231 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 KLHL8Q9P2G9 620 aaPredicted RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 COL14A1Q05707 1796 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 CXCL11O14625 94 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 KIF19Q2TAC6 998 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 ASIC4Q96FT7 647 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 PBKQ96KB5 322 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 XAB2Q9HCS7 855 aaKnown RBP15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 ADAMTS1Q9UHI8 967 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 SLC4A7Q9Y6M7 1214 aa15.18■□□□□ 0.02
PCDHA11-201ENST00000398640 IKBKBO14920 756 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 OCRLQ01968 901 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 DNAJC12Q9UKB3 198 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 PPP1R9AQ9ULJ8 1098 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 WNT10BO00744 389 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 TMEM270Q6UE05 265 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 MED4Q9NPJ6 270 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 ANLNQ9NQW6 1124 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 E9PMD0 336 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 RFX5P48382 616 aaPredicted RBP15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 NOP14P78316 857 aaKnown RBP15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 ANKRD20A4Q4UJ75 823 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 CCDC157Q569K6 752 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 ANKRD20A8PQ5CZ79 823 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 ANKRD20A2Q5SQ80 823 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 ANKRD20A1Q5TYW2 823 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 FBXL13Q8NEE6 735 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 PGBD4Q96DM1 585 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 YIPF2Q9BWQ6 316 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 TADA2AO75478 443 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 IRF1P10914 325 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 USP11P51784 963 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 INHBEP58166 350 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 FKBP1AP62942 108 aaKnown RBP15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 RESTQ13127 1097 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 TRMT10CQ7L0Y3 403 aaKnown RBP15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 SH3KBP1Q96B97 665 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 EDEM3Q9BZQ6 932 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 TSPYL2Q9H2G4 693 aaPredicted RBP15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 ANAPC7Q9UJX3 599 aa15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
PCDHA11-201ENST00000398640 HOXA10P31260 410 aaPredicted RBP15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 SIK2Q9H0K1 926 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 TMEM88BA6NKF7 163 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 APBA1Q02410 837 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 OXER1Q8TDS5 423 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 SP110Q9HB58 689 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 APOEP02649 317 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 NR3C2P08235 984 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 ZBED6P86452 979 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 SEPT1Q8WYJ6 367 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 SNX19Q92543 992 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 SAAL1Q96ER3 474 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 ADAM22Q9P0K1 906 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 A8MXQ7 604 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 NDUFA10O95299 355 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 ORC2Q13416 577 aaPredicted RBP15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 DRP2Q13474 957 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 CCHCR1Q8TD31 782 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 NOVA2Q9UNW9 492 aaKnown RBP15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 PIK3R2O00459 728 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 CHEK2O96017 543 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 LCP1P13796 627 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 TM4SF1P30408 202 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 HADHAP40939 763 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 RWDD2BP57060 319 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 LAMC2Q13753 1193 aa15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 PDCD7Q8N8D1 485 aaKnown RBP15.16■□□□□ 0.02
PCDHA11-201ENST00000398640 TTI1O43156 1089 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 ATP1A3P13637 1013 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms