RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CCSAPQ6IQ19 270 aaPredicted RBP21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 TOGARAM2Q6ZUX3 1019 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 SLC9A9Q8IVB4 645 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 ZBTB8OSQ8IWT0 167 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 SH3TC2Q8TF17 1288 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 ZNF668Q96K58 619 aaPredicted RBP21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 C2orf40Q9H1Z8 148 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 HDAC6Q9UBN7 1215 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 C17orf102A2RUQ5 167 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 MBLAC1A4D2B0 266 aaPredicted RBP21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 ANKRD63C9JTQ0 380 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 TEX33O43247 280 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 AKAP3O75969 853 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 VTNP04004 478 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 ADAM17P78536 824 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 MYBPC2Q14324 1141 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 HIC1Q14526 733 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 RNF180Q86T96 592 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 C12orf56Q8IXR9 622 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 KIAA0319LQ8IZA0 1049 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 PCSK9Q8NBP7 692 aaKnown RBP21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 BICD1Q96G01 975 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 NOC4LQ9BVI4 516 aaKnown RBP21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 MRFAP1Q9Y605 127 aa21.08■□□□□ 0.96
PDLIM2-204ENST00000397760 PES1O00541 588 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 HNRNPDLO14979 420 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 FANCGO15287 622 aa21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 SLC16A3O15427 465 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 EPB41P11171 864 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 CASP4P49662 377 aa21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 MARSP56192 900 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 RBL2Q08999 1139 aa21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 NBPF20Q3BBV1 942 aa21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 CBWD1Q9BRT8 395 aa21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 PCIF1Q9H4Z3 704 aa21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 ADGRG1Q9Y653 693 aa21.07■□□□□ 0.96
PDLIM2-204ENST00000397760 GNAT1P11488 350 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 CYP2C9P11712 490 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 ZNF200P98182 395 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 POU5F1BQ06416 359 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 PTPN21Q16825 1174 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 LHX8Q68G74 356 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 SLC39A4Q6P5W5 647 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 FRMD5Q7Z6J6 570 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 TMTC1Q8IUR5 882 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 TMEM174Q8WUU8 243 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 FRMD4BQ9Y2L6 1034 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 SMIM35A0A1B0GVV1 85 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 LGALS16A8MUM7 142 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 TREHO43280 583 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 ADSSP30520 456 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 HOXC8P31273 242 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 PSMC2P35998 433 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 LIG4P49917 911 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 PTENP60484 403 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 MAN2A1Q16706 1144 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 MIIPQ5JXC2 388 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 GPR161Q8N6U8 529 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 PPP1R16BQ96T49 567 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 CCDC113Q9H0I3 377 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 FAM49AQ9H0Q0 323 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 PRDM10Q9NQV6 1147 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 USP20Q9Y2K6 914 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 HTTP42858 3142 aa21.06■□□□□ 0.96
PDLIM2-204ENST00000397760 A0A087WZ62 844 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 EXOC3O60645 756 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 CLCN6P51797 869 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 UBXN1Q04323 297 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 VWA3BQ502W6 1294 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 RUFY4Q6ZNE9 571 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 TRIM59Q8IWR1 403 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 FAM186BQ8IYM0 893 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 WDR24Q96S15 920 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 FDXACB1Q9BRP7 624 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 MKNK1Q9BUB5 465 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 CARD6Q9BX69 1037 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 NFKBIZQ9BYH8 718 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 METTL14Q9HCE5 456 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 ZNF446Q9NWS9 450 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 HSPBP1Q9NZL4 362 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 ARMCX3Q9UH62 379 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 CENPFP49454 3210 aa21.05■□□□□ 0.96
PDLIM2-204ENST00000397760 INO80B-WBP1J3KQ70 363 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 PIGRP01833 764 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 PHKA2P46019 1235 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 MAPK6Q16659 721 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 XXYLT1Q8NBI6 393 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 LRRN4CLQ8ND94 238 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 NLRP7Q8WX94 980 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 POMGNT1Q8WZA1 660 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 TARS2Q9BW92 718 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 INO80BQ9C086 356 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 IFT122Q9HBG6 1241 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 PRKCBP05771 671 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 GPC3P51654 580 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 NLRP11P59045 1033 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 TMCO3Q6UWJ1 677 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 SCLT1Q96NL6 688 aa21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.04■□□□□ 0.96
PDLIM2-204ENST00000397760 NDST4Q9H3R1 872 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms