RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 BRD1O95696 1058 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 XRCC6P12956 609 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLTA-203ENST00000396603 ITGA4P13612 1032 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 VCPP55072 806 aaKnown RBP18.14■□□□□ 0.49
CLTA-203ENST00000396603 LONRF3Q496Y0 759 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 CCDC149Q6ZUS6 474 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 RNF168Q8IYW5 571 aaPredicted RBP18.14■□□□□ 0.49
CLTA-203ENST00000396603 SMG8Q8ND04 991 aaKnown RBP18.14■□□□□ 0.49
CLTA-203ENST00000396603 OXER1Q8TDS5 423 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 HDAC7Q8WUI4 952 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 AUTS2Q8WXX7 1259 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 HERC2P3Q9BVR0 1158 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 RGL1Q9NZL6 768 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 PCDHA12Q9UN75 941 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 GIT1Q9Y2X7 761 aa18.14■□□□□ 0.49
CLTA-203ENST00000396603 B4GALT3O60512 393 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 TSPAN1O60635 241 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 CTDNEP1O95476 244 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 EFEMP2O95967 443 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 URODP06132 367 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 ADH1AP07327 375 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 CNPP09543 421 aaKnown RBP18.13■□□□□ 0.49
CLTA-203ENST00000396603 KLRC2P26717 231 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 DSC1Q08554 894 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 RABEP1Q15276 862 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 COLGALT2Q8IYK4 626 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 RPS6KC1Q96S38 1066 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 EIF2AK1Q9BQI3 630 aaKnown RBP18.13■□□□□ 0.49
CLTA-203ENST00000396603 CSRNP2Q9H175 543 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 XPNPEP1Q9NQW7 623 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 CDH22Q9UJ99 828 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 IPPQ9Y573 584 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 ZDBF2Q9HCK1 2354 aa18.13■□□□□ 0.49
CLTA-203ENST00000396603 DENND4AQ7Z401 1863 aa18.12■□□□□ 0.49
CLTA-203ENST00000396603 GALR2O43603 387 aaPredicted RBP18.12■□□□□ 0.49
CLTA-203ENST00000396603 ST18O60284 1047 aa18.12■□□□□ 0.49
CLTA-203ENST00000396603 SP100P23497 879 aaPredicted RBP18.12■□□□□ 0.49
CLTA-203ENST00000396603 ARL2P36404 184 aa18.12■□□□□ 0.49
CLTA-203ENST00000396603 CYP4A11Q02928 519 aa18.12■□□□□ 0.49
CLTA-203ENST00000396603 CTTNQ14247 550 aaKnown RBP18.12■□□□□ 0.49
CLTA-203ENST00000396603 TPH2Q8IWU9 490 aa18.12■□□□□ 0.49
CLTA-203ENST00000396603 C12orf76Q8N812 135 aaPredicted RBP18.12■□□□□ 0.49
CLTA-203ENST00000396603 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
CLTA-203ENST00000396603 RXFP1Q9HBX9 757 aa18.12■□□□□ 0.49
CLTA-203ENST00000396603 ARL5CA6NH57 179 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 PROB1E7EW31 1015 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 POMCP01189 267 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 CLCN5P51795 746 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 AFF1P51825 1210 aaKnown RBP18.11■□□□□ 0.49
CLTA-203ENST00000396603 AK2P54819 239 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 MBTD1Q05BQ5 628 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 CALCRLQ16602 461 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 EARS2Q5JPH6 523 aaKnown RBP18.11■□□□□ 0.49
CLTA-203ENST00000396603 TMC5Q6UXY8 1006 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 GTF3C6Q969F1 213 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 PRIMPOLQ96LW4 560 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 CCDC43Q96MW1 224 aaKnown RBP18.11■□□□□ 0.49
CLTA-203ENST00000396603 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLTA-203ENST00000396603 GJB4Q9NTQ9 266 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 MARCH5Q9NX47 278 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 ARID2Q68CP9 1835 aa18.11■□□□□ 0.49
CLTA-203ENST00000396603 USP34Q70CQ2 3546 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 INO80B-WBP1J3KQ70 363 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 NEMFO60524 1076 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 FDPSP14324 419 aaKnown RBP18.1■□□□□ 0.49
CLTA-203ENST00000396603 GLUD2P49448 558 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 RARRES1P49788 294 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 DSG1Q02413 1049 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 CREMQ03060 361 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 NR5A1Q13285 461 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 AMHR2Q16671 573 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 STAMQ92783 540 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 COLEC11Q9BWP8 271 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 TRIM6Q9C030 488 aaPredicted RBP18.1■□□□□ 0.49
CLTA-203ENST00000396603 TTC12Q9H892 705 aaPredicted RBP18.1■□□□□ 0.49
CLTA-203ENST00000396603 CHST7Q9NS84 486 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 IGSF9Q9P2J2 1179 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 LIMD1Q9UGP4 676 aa18.1■□□□□ 0.49
CLTA-203ENST00000396603 A0A1B0GUA9 196 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 GLUD1P00367 558 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 WEE2P0C1S8 567 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 ARF4P18085 180 aaPredicted RBP18.09■□□□□ 0.49
CLTA-203ENST00000396603 MLH1P40692 756 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 OR1G1P47890 313 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 ORC2Q13416 577 aaPredicted RBP18.09■□□□□ 0.49
CLTA-203ENST00000396603 TDGQ13569 410 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 CAPSQ13938 189 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 KIAA0319Q5VV43 1072 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 ASTLQ6HA08 431 aaPredicted RBP18.09■□□□□ 0.49
CLTA-203ENST00000396603 SLC27A1Q6PCB7 646 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 MCPH1Q8NEM0 835 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 NXPE3Q969Y0 559 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 MTMR9Q96QG7 549 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 GAD1Q99259 594 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 PHOX2BQ99453 314 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 EIF2AQ9BY44 585 aaKnown RBP18.09■□□□□ 0.49
CLTA-203ENST00000396603 PLEKHA4Q9H4M7 779 aa18.09■□□□□ 0.49
CLTA-203ENST00000396603 BMP2KQ9NSY1 1161 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms