RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RAB30Q15771 203 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 SLC27A1Q6PCB7 646 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 RNF169Q8NCN4 708 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 TIGD1Q96MW7 591 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 ACO2Q99798 780 aaKnown RBP21.09■□□□□ 0.97
HOXA9-202ENST00000396345 TARS2Q9BW92 718 aaKnown RBP21.09■□□□□ 0.97
HOXA9-202ENST00000396345 EIF2AQ9BY44 585 aaKnown RBP21.09■□□□□ 0.97
HOXA9-202ENST00000396345 INSL6Q9Y581 213 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 SOX1O00570 391 aaPredicted RBP21.08■□□□□ 0.97
HOXA9-202ENST00000396345 KINO60870 393 aaKnown RBP21.08■□□□□ 0.97
HOXA9-202ENST00000396345 ZNF623O75123 536 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 GCNT3O95395 438 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 NPTXRO95502 500 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 PRR29P0C7W0 189 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 MYOGP15173 224 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 HTRA4P83105 476 aaPredicted RBP21.08■□□□□ 0.97
HOXA9-202ENST00000396345 ZC2HC1CQ53FD0 456 aaPredicted RBP21.08■□□□□ 0.97
HOXA9-202ENST00000396345 ZNF598Q86UK7 904 aaKnown RBP21.08■□□□□ 0.97
HOXA9-202ENST00000396345 BICD1Q96G01 975 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 YME1L1Q96TA2 773 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 ADPGKQ9BRR6 497 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 TRIM6Q9C030 488 aaPredicted RBP21.08■□□□□ 0.97
HOXA9-202ENST00000396345 TNFSF13BQ9Y275 285 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 PCDHB13Q9Y5F0 798 aa21.08■□□□□ 0.97
HOXA9-202ENST00000396345 KLRC4O43908 158 aa21.07■□□□□ 0.96
HOXA9-202ENST00000396345 ATF7P17544 494 aaPredicted RBP21.07■□□□□ 0.96
HOXA9-202ENST00000396345 FAM26FQ5R3K3 315 aa21.07■□□□□ 0.96
HOXA9-202ENST00000396345 EEF1DP3Q658K8 133 aa21.07■□□□□ 0.96
HOXA9-202ENST00000396345 MRPL10Q7Z7H8 261 aaKnown RBP21.07■□□□□ 0.96
HOXA9-202ENST00000396345 HPS3Q969F9 1004 aa21.07■□□□□ 0.96
HOXA9-202ENST00000396345 HVCN1Q96D96 273 aa21.07■□□□□ 0.96
HOXA9-202ENST00000396345 PGBD4Q96DM1 585 aa21.07■□□□□ 0.96
HOXA9-202ENST00000396345 STRA6Q9BX79 667 aa21.07■□□□□ 0.96
HOXA9-202ENST00000396345 YBX2Q9Y2T7 364 aaKnown RBP21.07■□□□□ 0.96
HOXA9-202ENST00000396345 LAMA2P24043 3122 aaKnown RBP21.06■□□□□ 0.96
HOXA9-202ENST00000396345 GOLGA6L22H0YM25 854 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 HOXA2O43364 376 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 PPP1R37O75864 691 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 DGKIO75912 1065 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 RPN1P04843 607 aaKnown RBP21.06■□□□□ 0.96
HOXA9-202ENST00000396345 MYBP10242 640 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 DNAJB2P25686 324 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 EHHADHQ08426 723 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 DPYDQ12882 1025 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 ALCAMQ13740 583 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 POSTNQ15063 836 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 DCAF4L1Q3SXM0 396 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 ZPBP2Q6X784 338 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 STXBP4Q6ZWJ1 553 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 APBB1IPQ7Z5R6 666 aaPredicted RBP21.06■□□□□ 0.96
HOXA9-202ENST00000396345 MAP4K3Q8IVH8 894 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 SMG8Q8ND04 991 aaKnown RBP21.06■□□□□ 0.96
HOXA9-202ENST00000396345 LPPQ93052 612 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 FGFBP2Q9BYJ0 223 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 LMBRD1Q9NUN5 540 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 EXOC1Q9NV70 894 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 HOOK1Q9UJC3 728 aaKnown RBP21.06■□□□□ 0.96
HOXA9-202ENST00000396345 IPPQ9Y573 584 aa21.06■□□□□ 0.96
HOXA9-202ENST00000396345 FGFR1P11362 822 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 LIG4P49917 911 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 GATMP50440 423 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 CASP5P51878 434 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 KMT5BQ4FZB7 885 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 L1TD1Q5T7N2 865 aaKnown RBP21.05■□□□□ 0.96
HOXA9-202ENST00000396345 CCDC47Q96A33 483 aaKnown RBP21.05■□□□□ 0.96
HOXA9-202ENST00000396345 TIFAQ96CG3 184 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 ZNF689Q96CS4 500 aaPredicted RBP21.05■□□□□ 0.96
HOXA9-202ENST00000396345 LRCH3Q96II8 777 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 ACCSQ96QU6 501 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 TCHPQ9BT92 498 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 NKX2-4Q9H2Z4 354 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 RC3H2Q9HBD1 1191 aaKnown RBP21.05■□□□□ 0.96
HOXA9-202ENST00000396345 PTPRHQ9HD43 1115 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 RNF19AQ9NV58 838 aa21.05■□□□□ 0.96
HOXA9-202ENST00000396345 SZT2Q5T011 3432 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 LAMA3Q16787 3333 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 LCHNA4D1U4 455 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 HNRNPDLO14979 420 aaKnown RBP21.04■□□□□ 0.96
HOXA9-202ENST00000396345 TOM1L1O75674 476 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 PIGRP01833 764 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 CA3P07451 260 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 ITGA4P13612 1032 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 PROZP22891 400 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 PNOCQ13519 176 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 ZNF568Q3ZCX4 644 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 MPZL3Q6UWV2 235 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 ZBTB33Q86T24 672 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 ELOA2Q8IYF1 753 aaPredicted RBP21.04■□□□□ 0.96
HOXA9-202ENST00000396345 HACE1Q8IYU2 909 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 GLIS3Q8NEA6 775 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 SP7Q8TDD2 431 aaPredicted RBP21.04■□□□□ 0.96
HOXA9-202ENST00000396345 ZBTB45Q96K62 511 aaPredicted RBP21.04■□□□□ 0.96
HOXA9-202ENST00000396345 NXF3Q9H4D5 531 aaKnown RBP21.04■□□□□ 0.96
HOXA9-202ENST00000396345 SLC39A2Q9NP94 309 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 EXOC7Q9UPT5 735 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 HES2Q9Y543 173 aa21.04■□□□□ 0.96
HOXA9-202ENST00000396345 TBKBP1A7MCY6 615 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 MEIS3P2A8K0S8 358 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 PRPF6O94906 941 aaKnown RBP21.03■□□□□ 0.96
HOXA9-202ENST00000396345 MATR3P43243 847 aaKnown RBP eCLIP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms