RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MYBL1P10243 752 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 YBX3P16989 372 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS41-203ENST00000395969 PROZP22891 400 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SLC8A3P57103 927 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 CKAP4Q07065 602 aaKnown RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 MTMR1Q13613 665 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 ZKSCAN8Q15776 578 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 ZNF792Q3KQV3 632 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 CEP85LQ5SZL2 805 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 FKBP15Q5T1M5 1219 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 ALS2CLQ60I27 953 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 KDM7AQ6ZMT4 941 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 ZNF483Q8TF39 744 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 USP6NLQ92738 828 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 MS4A4AQ96JQ5 239 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 FAM167AQ96KS9 214 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 AGBL1Q96MI9 1066 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 RUSC1Q9BVN2 902 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 RYDENQ9NUL5 291 aaKnown RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 GGA3Q9NZ52 723 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 MAGEC2Q9UBF1 373 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 PCDHA10Q9Y5I2 948 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SAR1BQ9Y6B6 198 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 ZHX2Q9Y6X8 837 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 A0A1B0GUA9 196 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 STRNO43815 780 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SERPING1P05155 500 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SUPT20HL2P0C7V6 817 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 ALDH5A1P51649 535 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 AP3M2P53677 418 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 EPC2Q52LR7 807 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 BRDTQ58F21 947 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 SLC30A10Q6XR72 485 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 ENOSF1Q7L5Y1 443 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SAMD7Q7Z3H4 446 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 GSPT2Q8IYD1 628 aaKnown RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 NME8Q8N427 588 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 ZNF473Q8WTR7 871 aaKnown RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 ATP6V0A1Q93050 837 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SLC35C1Q96A29 364 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 CDCA5Q96FF9 252 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 THOC1Q96FV9 657 aaKnown RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 MPHOSPH6Q99547 160 aaKnown RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 TAF1DQ9H5J8 278 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 VAT1LQ9HCJ6 419 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 RNF146Q9NTX7 359 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 TSKSQ9UJT2 592 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 TTC26A0AVF1 554 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 E9PMD0 336 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 FAM189A1O60320 539 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 KIF4AO95239 1232 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 ATP1A1P05023 1023 aaKnown RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 PSAPP07602 524 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 NR3C2P08235 984 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 LSP1P33241 339 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 CCNHP51946 323 aaPredicted RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 PSMC6P62333 389 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 SNX1Q13596 522 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 SNCBQ16143 134 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 TSNAXIP1Q2TAA8 658 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 GNPTABQ3T906 1256 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 XKR3Q5GH77 459 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 OTUD6AQ7L8S5 288 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 MMGT1Q8N4V1 131 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 UBR7Q8N806 425 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 C1orf131Q8NDD1 294 aaKnown RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.8□□□□□ -1.486e-6■■■■■ 28.1
VPS41-203ENST00000395969 CAVIN3Q969G5 261 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 WRNIP1Q96S55 665 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 SPOCK3Q9BQ16 436 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 LXNQ9BS40 222 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 GPR88Q9GZN0 384 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 VRTNQ9H8Y1 702 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 ACTR5Q9H9F9 607 aaPredicted RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 PCDHGC5Q9Y5F6 944 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 POTEFA5A3E0 1075 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 CETN3O15182 167 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 AP1G2O75843 785 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 NDUFA10O95299 355 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 FAM163BP0C2L3 166 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 POTEIP0CG38 1075 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 PSMC2P35998 433 aaKnown RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 NAMPTP43490 491 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 GPC3P51654 580 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 ADCY2Q08462 1091 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 PDCLQ13371 301 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 NAA25Q14CX7 972 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 KYAT1Q16773 422 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 TSR1Q2NL82 804 aaKnown RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 C1orf220Q5T0J3 134 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 CYB5D1Q6P9G0 228 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 POTEGQ6S5H5 508 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 ZPBP2Q6X784 338 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 INTS8Q75QN2 995 aaKnown RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 IRF2BP2Q7Z5L9 587 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 FUKQ8N0W3 1084 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 TMEM161BQ8NDZ6 487 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 IL31RAQ8NI17 732 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 ARL8AQ96BM9 186 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms