RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
SUMO1-203ENST00000392246 SLC27A1Q6PCB7 646 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 ZPBP2Q6X784 338 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 MAP4K3Q8IVH8 894 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 MYOCDQ8IZQ8 938 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 ERCC4Q92889 916 aaPredicted RBP16.37■□□□□ 0.21
SUMO1-203ENST00000392246 BICD1Q96G01 975 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 ACCSQ96QU6 501 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 SLC9A7Q96T83 725 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 ADPGKQ9BRR6 497 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 FAM105AQ9NUU6 356 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 EXOC7Q9UPT5 735 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 TNFSF13BQ9Y275 285 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 A0A1W2PPC1 479 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 PRPF6O94906 941 aaKnown RBP16.36■□□□□ 0.21
SUMO1-203ENST00000392246 PIGRP01833 764 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 RAB27AP51159 221 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 STK4Q13043 487 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 UBXN11Q5T124 520 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 EPM2AIP1Q7L775 607 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-203ENST00000392246 APBB1IPQ7Z5R6 666 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-203ENST00000392246 CDR2LQ86X02 465 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-203ENST00000392246 TOP1MTQ969P6 601 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-203ENST00000392246 NUP62CLQ9H1M0 184 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 CLSTN2Q9H4D0 955 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 PDZD7Q9H5P4 517 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 ELAC1Q9H777 363 aaKnown RBP16.36■□□□□ 0.21
SUMO1-203ENST00000392246 TMEM206Q9H813 350 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 COLQQ9Y215 455 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-203ENST00000392246 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 PTPRSQ13332 1948 aa16.36■□□□□ 0.21
SUMO1-203ENST00000392246 HNRNPDLO14979 420 aaKnown RBP16.35■□□□□ 0.21
SUMO1-203ENST00000392246 ZNF623O75123 536 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 TOM1L1O75674 476 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 EOMESO95936 686 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 STAG3L1P0CL83 205 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 ATP2A2P16615 1042 aaKnown RBP16.35■□□□□ 0.21
SUMO1-203ENST00000392246 LIG4P49917 911 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 ECHDC2Q86YB7 292 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 NPAS4Q8IUM7 802 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 KIAA0895Q8NCT3 520 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 GLIS3Q8NEA6 775 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 ZNF507Q8TCN5 953 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 TCHPQ9BT92 498 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 EIF2AQ9BY44 585 aaKnown RBP16.35■□□□□ 0.21
SUMO1-203ENST00000392246 PTPRHQ9HD43 1115 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 LRFN2Q9ULH4 789 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 PCDHB2Q9Y5E7 798 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 UBE4BO95155 1302 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 NPTXRO95502 500 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 IBSPP21815 317 aaPredicted RBP16.35■□□□□ 0.21
SUMO1-203ENST00000392246 PROZP22891 400 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 KCNA1Q09470 495 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 DCAF4L1Q3SXM0 396 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 EEF1DP3Q658K8 133 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 SCFD1Q8WVM8 642 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
SUMO1-203ENST00000392246 TMEM161AQ9NX61 479 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 KIAA1468Q9P260 1216 aa16.35■□□□□ 0.21
SUMO1-203ENST00000392246 CLDN3O15551 220 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 UPP2O95045 317 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 KIF20AO95235 890 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 BMT2Q1RMZ1 405 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 ZNF568Q3ZCX4 644 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 MPZL3Q6UWV2 235 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 MRPL10Q7Z7H8 261 aaKnown RBP16.34■□□□□ 0.21
SUMO1-203ENST00000392246 ZNF598Q86UK7 904 aaKnown RBP16.34■□□□□ 0.21
SUMO1-203ENST00000392246 HERC6Q8IVU3 1022 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 HACE1Q8IYU2 909 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 CRIPAKQ8N1N5 446 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 PGBD4Q96DM1 585 aa16.34■□□□□ 0.21
SUMO1-203ENST00000392246 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.33■□□□□ 0.2
SUMO1-203ENST00000392246 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.33■□□□□ 0.2
SUMO1-203ENST00000392246 GJB5O95377 273 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 MATR3P43243 847 aaKnown RBP eCLIP16.33■□□□□ 0.2
SUMO1-203ENST00000392246 ZNF658Q5TYW1 1059 aaPredicted RBP16.33■□□□□ 0.2
SUMO1-203ENST00000392246 SLFN12LQ6IEE8 588 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 ZBTB33Q86T24 672 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 RNF169Q8NCN4 708 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 SMG8Q8ND04 991 aaKnown RBP16.33■□□□□ 0.2
SUMO1-203ENST00000392246 ZBTB45Q96K62 511 aaPredicted RBP16.33■□□□□ 0.2
SUMO1-203ENST00000392246 ZBED2Q9BTP6 218 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 ANKFY1Q9P2R3 1169 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 MAN1B1Q9UKM7 699 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 GDAQ9Y2T3 454 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 IPPQ9Y573 584 aa16.33■□□□□ 0.2
SUMO1-203ENST00000392246 ABLIM1O14639 778 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 HOXA2O43364 376 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 MCF2P10911 925 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 ATF7P17544 494 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-203ENST00000392246 HOXD13P35453 343 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 MCL1Q07820 350 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 NOLC1Q14978 699 aaKnown RBP eCLIP16.32■□□□□ 0.2
SUMO1-203ENST00000392246 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
SUMO1-203ENST00000392246 FAM117BQ6P1L5 589 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 SLC39A4Q6P5W5 647 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 TMCO2Q7Z6W1 182 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-203ENST00000392246 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms