RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 PCDHA7Q9UN72 937 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ARFGEF2Q9Y6D5 1785 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ORC4O43929 436 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ATP2C2O75185 946 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 SMARCA1P28370 1054 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 HSPA1LP34931 641 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 TRAPPC11Q7Z392 1133 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 KRT26Q7Z3Y9 468 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 MED10Q9BTT4 135 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ABCB6Q9NP58 842 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ZFP69BQ9UJL9 534 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 APPL1Q9UKG1 709 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ATP8A1Q9Y2Q0 1164 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 RTN3O95197 1032 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ZBED1O96006 694 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ABL1P00519 1130 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 COPZ1P61923 177 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 CAPRIN1Q14444 709 aaKnown RBP5.18□□□□□ -1.58
PTPRD-203ENST00000381196 MFSD14CQ5VZR4 134 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 OTUD6AQ7L8S5 288 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTPRD-203ENST00000381196 KATNAL1Q9BW62 490 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 MRPS26Q9BYN8 205 aaKnown RBP5.18□□□□□ -1.58
PTPRD-203ENST00000381196 CARD9Q9H257 536 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 NRBP2Q9NSY0 501 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 DDX56Q9NY93 547 aaKnown RBP5.18□□□□□ -1.58
PTPRD-203ENST00000381196 UVRAGQ9P2Y5 699 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 ADGRG1Q9Y653 693 aa5.18□□□□□ -1.58
PTPRD-203ENST00000381196 CLUHO75153 1309 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PRDM1O75626 825 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SERPINB1P30740 379 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 GJA8P48165 433 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 FKBP3Q00688 224 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 RESTQ13127 1097 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SNX1Q13596 522 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 EDRF1Q3B7T1 1238 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 Q3C1V9 767 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 COBLL1Q53SF7 1204 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PATL1Q86TB9 770 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 DHX58Q96C10 678 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF512BQ96KM6 892 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 OSBPL8Q9BZF1 889 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ARMT1Q9H993 441 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 STRIP2Q9ULQ0 834 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 NUMA1Q14980 2115 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CEMIPQ8WUJ3 1361 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 FRMPD4Q14CM0 1322 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 FAM237AA0A1B0GTK4 181 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CLRN2A0PK11 232 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 FKBP9O95302 570 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SYF2O95926 243 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 POLR2MP0CAP2 368 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SP100P23497 879 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 GGCXP38435 758 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 IRAK1P51617 712 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 LRRC36Q1X8D7 754 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ABCB5Q2M3G0 1257 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TUBA3EQ6PEY2 450 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 IKBIPQ70UQ0 350 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TRMT44Q8IYL2 757 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 OR9Q1Q8NGQ5 310 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 RAET1EQ8TD07 263 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PBXIP1Q96AQ6 731 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TMEM237Q96Q45 408 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 GORASP1Q9BQQ3 440 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TEX12Q9BXU0 123 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CEP44Q9C0F1 390 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SNX12Q9UMY4 172 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ARHGAP23Q9P227 1491 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CPDO75976 1380 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SIPA1L3O60292 1781 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF701M0R085 212 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ECE1P42892 770 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 AFMP43652 599 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TAB1Q15750 504 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 HIBCHQ6NVY1 386 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TTC30BQ8N4P2 665 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 GANCQ8TET4 914 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ASZ1Q8WWH4 475 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 XAGE2Q96GT9 111 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SNF8Q96H20 258 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PLEKHA4Q9H4M7 779 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 NOD2Q9HC29 1040 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 FBXO28Q9NVF7 368 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 FBXL5Q9UKA1 691 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PADI4Q9UM07 663 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CAMTA1Q9Y6Y1 1673 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TNPO2O14787 897 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 GAS7O60861 476 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CSDE1O75534 798 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ABHD2P08910 425 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CD19P15391 556 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 MCM7P33993 719 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 INPP5AQ14642 412 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SURF1Q15526 300 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ODR4Q5SWX8 454 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TSHZ3Q63HK5 1081 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CRLF3Q8IUI8 442 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 DHX40Q8IX18 779 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 AADATQ8N5Z0 425 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms