RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ACTR2P61160 394 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 WDR78Q5VTH9 848 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 MIER3Q7Z3K6 550 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 CTAGE6Q86UF2 777 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 CTAGE4Q8IX94 777 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 MMGT1Q8N4V1 131 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SYT2Q8N9I0 419 aaPredicted RBP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 NEK11Q8NG66 645 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 KCTD10Q9H3F6 313 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 FAM184BQ9ULE4 1060 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 NOVA2Q9UNW9 492 aaKnown RBP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 ENC1O14682 589 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SHOX2O60902 331 aaPredicted RBP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 AKR1A1P14550 325 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SMPD1P17405 629 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SCP2P22307 547 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 QARSP47897 775 aaKnown RBP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 GJA9P57773 515 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 LRRC63Q05C16 580 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SEPT1Q8WYJ6 367 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 ATP6V0A1Q93050 837 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 JAKMIP2Q96AA8 810 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 NACC1Q96RE7 527 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SNX12Q9UMY4 172 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 ATP8B3O60423 1300 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 ZNF185O15231 689 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 MARCH6O60337 910 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 MSCO60682 206 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 DUSP11O75319 330 aaKnown RBP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 TXNP10599 105 aaKnown RBP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 PKN2Q16513 984 aaKnown RBP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SEPT14Q6ZU15 432 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SND1Q7KZF4 910 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 RPGRIP1Q96KN7 1286 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 FAM167AQ96KS9 214 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SH3GL2Q99962 352 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SAR1BQ9Y6B6 198 aa8.44□□□□□ -1.06
CDKL5-202ENST00000379996 MYH9P35579 1960 aaKnown RBP8.44□□□□□ -1.06
CDKL5-202ENST00000379996 SEPT4O43236 478 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 KRT83P78385 493 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 AMPD3Q01432 767 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 GRM1Q13255 1194 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 CCL14Q16627 93 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 FAM160B1Q5W0V3 765 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 FAM114A1Q8IWE2 563 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 EXOC8Q8IYI6 725 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 TRPV1Q8NER1 839 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 ANKRD20A12PQ8NF67 263 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 LARP4BQ92615 738 aaKnown RBP8.43□□□□□ -1.06
CDKL5-202ENST00000379996 CEP89Q96ST8 783 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 PCYT2Q99447 389 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 EDEM3Q9BZQ6 932 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 NDST4Q9H3R1 872 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 GUCA1BQ9UMX6 200 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 PTPN22Q9Y2R2 807 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 PPFIA4O75335 1185 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 GGPS1O95749 300 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 RHOXF2BP0C7M4 288 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 HOXC8P31273 242 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 PSMD2Q13200 908 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 MAN2A1Q16706 1144 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 LY6KQ17RY6 165 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 VARS2Q5ST30 1063 aaKnown RBP8.43□□□□□ -1.06
CDKL5-202ENST00000379996 CCDC122Q5T0U0 273 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 PDXDC1Q6P996 788 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 TXLNBQ8N3L3 684 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 FAM71BQ8TC56 605 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 SYN2Q92777 582 aaPredicted RBP8.43□□□□□ -1.06
CDKL5-202ENST00000379996 RHOXF2Q9BQY4 288 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 LXNQ9BS40 222 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 SEZ6LQ9BYH1 1024 aa8.43□□□□□ -1.06
CDKL5-202ENST00000379996 POLR3GO15318 223 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-202ENST00000379996 HSPA8P11142 646 aaKnown RBP8.42□□□□□ -1.06
CDKL5-202ENST00000379996 CYP2B6P20813 491 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 GUCY2CP25092 1073 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 HOXD13P35453 343 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 RTP1P59025 263 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 TNFAIP2Q03169 654 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 SLC20A2Q08357 652 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 STIM1Q13586 685 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 TARBP2Q15633 366 aaKnown RBP8.42□□□□□ -1.06
CDKL5-202ENST00000379996 PHLDB3Q6NSJ2 640 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 CYFIP1Q7L576 1253 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 EPM2AIP1Q7L775 607 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-202ENST00000379996 GJA10Q969M2 543 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 DYDC2Q96IM9 177 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 PDLIM7Q9NR12 457 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 PDGFCQ9NRA1 345 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 SSU72P8A0A1W2PR75 194 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 HAS3O00219 553 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 MMP3P08254 477 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 MYBP10242 640 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 ADCYAP1R1P41586 468 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 CPT1AP50416 773 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 ASIC1P78348 528 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 TBC1D8BQ0IIM8 1120 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 CCNI2Q6ZMN8 369 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-202ENST00000379996 DHX37Q8IY37 1157 aaKnown RBP8.42□□□□□ -1.06
CDKL5-202ENST00000379996 EHBP1Q8NDI1 1231 aa8.42□□□□□ -1.06
CDKL5-202ENST00000379996 GIPC2Q8TF65 315 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms