RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 SEMA3FQ13275 785 aa17.2■□□□□ 0.34
LRRC47-201ENST00000378251 TMEM106CQ9BVX2 250 aa17.2■□□□□ 0.34
LRRC47-201ENST00000378251 PHRF1Q9P1Y6 1649 aaKnown RBP17.2■□□□□ 0.34
LRRC47-201ENST00000378251 PPP1R11O60927 126 aaPredicted RBP17.19■□□□□ 0.34
LRRC47-201ENST00000378251 UCHL3P15374 230 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 THPOP40225 353 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 OAZ1P54368 228 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 PPP6R3Q5H9R7 873 aaPredicted RBP17.19■□□□□ 0.34
LRRC47-201ENST00000378251 RNF180Q86T96 592 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 NSMCE1Q8WV22 266 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 FHOD1Q9Y613 1164 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 ITGB5P18084 799 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 ADORA2BP29275 332 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 PAK2Q13177 524 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 EPC2Q52LR7 807 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 MAP7D3Q8IWC1 876 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 CCNYQ8ND76 341 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 HAS1Q92839 578 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 TRIM11Q96F44 468 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 ABHD16BQ9H3Z7 469 aa17.19■□□□□ 0.34
LRRC47-201ENST00000378251 SRGAP2O75044 1071 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 TBC1D8O95759 1140 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 PDGFRBP09619 1106 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 ITKQ08881 620 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 RGMBQ6NW40 437 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 GJB7Q6PEY0 223 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 RFX6Q8HWS3 928 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 SLITRK6Q9H5Y7 841 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 ZWILCHQ9H900 591 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
LRRC47-201ENST00000378251 WEE2P0C1S8 567 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 MAIP1Q8WWC4 291 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 ADGRG1Q9Y653 693 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 A0A1W2PQC6 194 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 M0QYV0 167 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 ASAP2O43150 1006 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 TGFB3P10600 412 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 C4orf19Q8IY42 314 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 SCFD1Q8WVM8 642 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 JRKLQ9Y4A0 524 aa17.18■□□□□ 0.34
LRRC47-201ENST00000378251 A0A087WZ62 844 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 GOLGA6CA6NDK9 693 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 SEC31AO94979 1220 aaKnown RBP17.17■□□□□ 0.34
LRRC47-201ENST00000378251 GOLGA6DP0CG33 693 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 NR1I3Q14994 352 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 BRD3Q15059 726 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 CTAGE3PQ8IX95 158 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 SLC30A5Q8TAD4 765 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 HAUS1Q96CS2 278 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 OSMRQ99650 979 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 FDXACB1Q9BRP7 624 aaPredicted RBP17.17■□□□□ 0.34
LRRC47-201ENST00000378251 AP1M1Q9BXS5 423 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 BLOC1S4Q9NUP1 217 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 GOLGA6AQ9NYA3 693 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 PCSK1NQ9UHG2 260 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 PACSIN2Q9UNF0 486 aaPredicted RBP17.17■□□□□ 0.34
LRRC47-201ENST00000378251 PALMO75781 387 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 KRT1P04264 644 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 BEX3Q00994 111 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 DEFB115Q30KQ5 88 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 MAP2K2P36507 400 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 SF3A3Q12874 501 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■■■□ 19.8
LRRC47-201ENST00000378251 RIOX2Q8IUF8 465 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 RNF139Q8WU17 664 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 SEMA6BQ9H3T3 888 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 SSX2IPQ9Y2D8 614 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 PABPN1LA6NDY0 278 aaKnown RBP17.17■□□□□ 0.34
LRRC47-201ENST00000378251 FZD9O00144 591 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 POP1Q99575 1024 aaKnown RBP17.17■□□□□ 0.34
LRRC47-201ENST00000378251 HEMGNQ9BXL5 484 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 RAB17Q9H0T7 212 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 VPS37BQ9H9H4 285 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 CAPN11Q9UMQ6 739 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 PHLPP2Q6ZVD8 1323 aa17.17■□□□□ 0.34
LRRC47-201ENST00000378251 RRN3P2A6NIE6 340 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 HLA-DRAP01903 254 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 PSMA2P25787 234 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 TMEM132DQ14C87 1099 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.16■□□□□ 0.34
LRRC47-201ENST00000378251 B4GALNT4Q76KP1 1039 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 TEX2Q8IWB9 1127 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 RPGRIP1Q96KN7 1286 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 TRIM17Q9Y577 477 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 ARHGEF37A1IGU5 675 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 NPTXRO95502 500 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 FGFR4P22455 802 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 TBXAS1P24557 533 aaPredicted RBP17.16■□□□□ 0.34
LRRC47-201ENST00000378251 PMS1P54277 932 aaKnown RBP17.16■□□□□ 0.34
LRRC47-201ENST00000378251 PDXDC1Q6P996 788 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 ZNF720Q7Z2F6 126 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 APEX2Q9UBZ4 518 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 RGS17Q9UGC6 210 aaPredicted RBP17.16■□□□□ 0.34
LRRC47-201ENST00000378251 UBE4BO95155 1302 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 PRPSAP2O60256 369 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 UBA1P22314 1058 aaKnown RBP17.16■□□□□ 0.34
LRRC47-201ENST00000378251 YY1P25490 414 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 SOX5P35711 763 aa17.16■□□□□ 0.34
LRRC47-201ENST00000378251 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
LRRC47-201ENST00000378251 TRIP13Q15645 432 aaPredicted RBP17.16■□□□□ 0.34
LRRC47-201ENST00000378251 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms