RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 EPHB4P54760 987 aa17.31■□□□□ 0.36
RGP1-201ENST00000378078 FKBP3Q00688 224 aaKnown RBP17.31■□□□□ 0.36
RGP1-201ENST00000378078 MIER2Q8N344 545 aa17.31■□□□□ 0.36
RGP1-201ENST00000378078 PBKQ96KB5 322 aa17.31■□□□□ 0.36
RGP1-201ENST00000378078 RARBP10826 455 aa17.31■□□□□ 0.36
RGP1-201ENST00000378078 SLC9A1P19634 815 aa17.31■□□□□ 0.36
RGP1-201ENST00000378078 DPF3Q92784 378 aa17.31■□□□□ 0.36
RGP1-201ENST00000378078 RNF146Q9NTX7 359 aa17.31■□□□□ 0.36
RGP1-201ENST00000378078 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.31■□□□□ 0.36
RGP1-201ENST00000378078 SMARCA1P28370 1054 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 MAPK9P45984 424 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 TWF1Q12792 350 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 PDAP1Q13442 181 aaKnown RBP17.3■□□□□ 0.36
RGP1-201ENST00000378078 FAM161BQ96MY7 647 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 MAN1C1Q9NR34 630 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 PCDHB7Q9Y5E2 793 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 KDM5AP29375 1690 aaKnown RBP17.3■□□□□ 0.36
RGP1-201ENST00000378078 GFAPP14136 432 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 ALDH6A1Q02252 535 aaKnown RBP17.3■□□□□ 0.36
RGP1-201ENST00000378078 MTMR2Q13614 643 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 AMHR2Q16671 573 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 PRR23CQ6ZRP0 262 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 GRAPQ13588 217 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 EFHC2Q5JST6 749 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 GRAPLQ8TC17 118 aaPredicted RBP17.3■□□□□ 0.36
RGP1-201ENST00000378078 DHX36Q9H2U1 1008 aaKnown RBP17.3■□□□□ 0.36
RGP1-201ENST00000378078 HMOX2P30519 316 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 CHSY1Q86X52 802 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 TRIM48Q8IWZ4 208 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 ZBED8Q8IZ13 594 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 SCG3Q8WXD2 468 aaKnown RBP17.3■□□□□ 0.36
RGP1-201ENST00000378078 FAM118BQ9BPY3 351 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 RWDD2AQ9UIY3 292 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 SH2B2O14492 632 aaPredicted RBP17.3■□□□□ 0.36
RGP1-201ENST00000378078 KCNN4O15554 427 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 NBNO60934 754 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 CCDC33Q8N5R6 958 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 ACAP3Q96P50 834 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 PCDHGB4Q9UN71 923 aa17.3■□□□□ 0.36
RGP1-201ENST00000378078 TRIM60Q495X7 471 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 BTBD6Q96KE9 485 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 SH3BP1Q9Y3L3 701 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 C6orf222P0C671 652 aaPredicted RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 ARL4CP56559 192 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 SESN2P58004 480 aaPredicted RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 PDIA2Q13087 525 aaKnown RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 TRIM54Q9BYV2 358 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 FEM1BQ9UK73 627 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 SPTLC1O15269 473 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 TOGARAM2Q6ZUX3 1019 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 NEDD4P46934 1319 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 ENDOD1O94919 500 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 TCF3P15923 654 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 TCN1P20061 433 aaPredicted RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 LRRC36Q1X8D7 754 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 DEPDC1Q5TB30 811 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 PPIEQ9UNP9 301 aaKnown RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 BLMP54132 1417 aaPredicted RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 P4HA2O15460 535 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 CUL3Q13618 768 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 R3HDM1Q15032 1099 aaKnown RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 SDE2Q6IQ49 451 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 PID1Q7Z2X4 250 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 TMA16Q96EY4 203 aaKnown RBP17.29■□□□□ 0.36
RGP1-201ENST00000378078 AK8Q96MA6 479 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 KDM4CQ9H3R0 1056 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 PPP6R2O75170 966 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 JAK3P52333 1124 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 ZMYM1Q5SVZ6 1142 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 BTNL9Q6UXG8 535 aa17.29■□□□□ 0.36
RGP1-201ENST00000378078 NUDT18Q6ZVK8 323 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 NLRP10Q86W26 655 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 MB21D1Q8N884 522 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 MAGED4Q96JG8 741 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 NDST4Q9H3R1 872 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 PKP3Q9Y446 797 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 MMEP08473 750 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 HMGCS2P54868 508 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 RPS6P62753 249 aaKnown RBP17.28■□□□□ 0.36
RGP1-201ENST00000378078 CYTH3O43739 400 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 CYP21A2P08686 494 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 OCA2Q04671 838 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 MEI1Q5TIA1 1274 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 INPP5DQ92835 1189 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 TMEM143Q96AN5 459 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 CENPKQ9BS16 269 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 FAM167BQ9BTA0 163 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 DMAP1Q9NPF5 467 aaPredicted RBP17.28■□□□□ 0.36
RGP1-201ENST00000378078 VAMP7P51809 220 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 ZNF445P59923 1031 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 ZNF512Q96ME7 567 aaPredicted RBP17.28■□□□□ 0.36
RGP1-201ENST00000378078 PLEKHA5Q9HAU0 1116 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 MAN1A2O60476 641 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 LDHAP00338 332 aaKnown RBP17.28■□□□□ 0.36
RGP1-201ENST00000378078 UBE3CQ15386 1083 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 AP1ARQ63HQ0 302 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms