RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 GLYCTKQ8IVS8 523 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 RFFLQ8WZ73 363 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 KCNB2Q92953 911 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 ERAP1Q9NZ08 941 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 SCAF8Q9UPN6 1271 aaKnown RBP19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 PXDNQ92626 1479 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 SAMD3Q8N6K7 520 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 PGBD4Q96DM1 585 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 TMEM60Q9H2L4 133 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 DDX56Q9NY93 547 aaKnown RBP19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 TUBE1Q9UJT0 475 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 GTF2A2P52657 109 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 IRX4P78413 519 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 SLC7A5Q01650 507 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 RHOT1Q8IXI2 618 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 GANCQ8TET4 914 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 NUDT12Q9BQG2 462 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 POLR3CQ9BUI4 534 aaPredicted RBP19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 WNT8AQ9H1J5 351 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 IQANK1A0A1B0GTG1 560 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 KBTBD13C9JR72 458 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 EIF3DO15371 548 aaKnown RBP eCLIP19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 CLCN6P51797 869 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 CAV1Q03135 178 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 IQCB1Q15051 598 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 STILQ15468 1287 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 WDR72Q3MJ13 1102 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 HPS3Q969F9 1004 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 CFAP36Q96G28 342 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 HEMGNQ9BXL5 484 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 MROH2AA6NES4 1674 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 ADORA2BP29275 332 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 PMLP29590 882 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 LAMC2Q13753 1193 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 SH2D3AQ9BRG2 576 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 GPBP1L1Q9HC44 474 aaPredicted RBP19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 SALL1Q9NSC2 1324 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 RECQLP46063 649 aaPredicted RBP19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 RBBP5Q15291 538 aaKnown RBP19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 VPS39Q96JC1 886 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 AGPAT1Q99943 283 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 PPP2R3BQ9Y5P8 575 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 C6orf118Q5T5N4 469 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 FAM102AQ5T9C2 384 aaPredicted RBP19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 FBXO38Q6PIJ6 1188 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 ERO1BQ86YB8 467 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 DEPDC1BQ8WUY9 529 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 PARVAQ9NVD7 372 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 PAMP19021 973 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 ADCY2Q08462 1091 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 STK4Q13043 487 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 EFHC2Q5JST6 749 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 TXNRD3Q86VQ6 643 aa19.05■□□□□ 0.64
CLSTN1-202ENST00000377298 RNF219Q5W0B1 726 aaPredicted RBP19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 HVCN1Q96D96 273 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 TAAR1Q96RJ0 339 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 STK33Q9BYT3 514 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 APEX2Q9UBZ4 518 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 HPCAL4Q9UM19 191 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 COL3A1P02461 1466 aaPredicted RBP19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 A0A1B0GTH6 734 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 SNRNP35Q16560 246 aaKnown RBP19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 AGAP1Q9UPQ3 857 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 HEY1Q9Y5J3 304 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 SLCO1A2P46721 670 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 MOXD1Q6UVY6 613 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 ACER1Q8TDN7 264 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 ZKSCAN4Q969J2 545 aaPredicted RBP19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 RNF25Q96BH1 459 aaPredicted RBP19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 PCSK1NQ9UHG2 260 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 FNDC3AQ9Y2H6 1198 aaKnown RBP19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 GRID2IPA4D2P6 1211 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 CPB1P15086 417 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 STX1BP61266 288 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 CCDC144BQ3MJ40 725 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 CCDC197Q8NCU1 140 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 GDAP1Q8TB36 358 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 GMCL1Q96IK5 515 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 PRMT7Q9NVM4 692 aaPredicted RBP19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 NFU1Q9UMS0 254 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 STK38LQ9Y2H1 464 aa19.04■□□□□ 0.64
CLSTN1-202ENST00000377298 RRN3P2A6NIE6 340 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 FMO5P49326 533 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 BACE1P56817 501 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 LMBRD2Q68DH5 695 aaPredicted RBP19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 ELOA2Q8IYF1 753 aaPredicted RBP19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 DPYSL4O14531 572 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 BNIP3LO60238 219 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 ACOT2P49753 483 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 CXCL9Q07325 125 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 VEPH1Q14D04 833 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 DGKDQ16760 1214 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 SGSM1Q2NKQ1 1148 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 MMEL1Q495T6 779 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 TEX2Q8IWB9 1127 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 MKNK1Q9BUB5 465 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 TBK1Q9UHD2 729 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 SNX24Q9Y343 169 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 IGSF9BQ9UPX0 1349 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 KRT37O76014 449 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms