RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 HERC2P3Q9BVR0 1158 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 NFKBIZQ9BYH8 718 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 ANKEF1Q9NU02 776 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 LIMD1Q9UGP4 676 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 TPCN1Q9ULQ1 816 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 PCDHA12Q9UN75 941 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 IPPQ9Y573 584 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 TSPAN1O60635 241 aa25.83■■□□□ 1.73
C9orf47-202ENST00000375850 SLITRK3O94933 977 aa25.83■■□□□ 1.73
C9orf47-202ENST00000375850 POMCP01189 267 aa25.83■■□□□ 1.73
C9orf47-202ENST00000375850 ADH1AP07327 375 aa25.83■■□□□ 1.73
C9orf47-202ENST00000375850 CYP4A11Q02928 519 aa25.83■■□□□ 1.73
C9orf47-202ENST00000375850 CTTNQ14247 550 aaKnown RBP25.83■■□□□ 1.73
C9orf47-202ENST00000375850 SMG8Q8ND04 991 aaKnown RBP25.83■■□□□ 1.73
C9orf47-202ENST00000375850 ATOH1Q92858 354 aaPredicted RBP25.83■■□□□ 1.73
C9orf47-202ENST00000375850 RPS6KC1Q96S38 1066 aa25.83■■□□□ 1.73
C9orf47-202ENST00000375850 PHOX2BQ99453 314 aa25.83■■□□□ 1.73
C9orf47-202ENST00000375850 CSRNP2Q9H175 543 aa25.83■■□□□ 1.73
C9orf47-202ENST00000375850 ZMYM2Q9UBW7 1377 aa25.82■■□□□ 1.72
C9orf47-202ENST00000375850 COLGALT2Q8IYK4 626 aa25.82■■□□□ 1.72
C9orf47-202ENST00000375850 GPR65Q8IYL9 337 aa25.82■■□□□ 1.72
C9orf47-202ENST00000375850 CCDC43Q96MW1 224 aaKnown RBP25.82■■□□□ 1.72
C9orf47-202ENST00000375850 HSD17B14Q9BPX1 270 aa25.82■■□□□ 1.72
C9orf47-202ENST00000375850 EIF2AK1Q9BQI3 630 aaKnown RBP25.82■■□□□ 1.72
C9orf47-202ENST00000375850 BMP2KQ9NSY1 1161 aaPredicted RBP25.82■■□□□ 1.72
C9orf47-202ENST00000375850 GIT1Q9Y2X7 761 aa25.82■■□□□ 1.72
C9orf47-202ENST00000375850 ARL5CA6NH57 179 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 INO80B-WBP1J3KQ70 363 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 PDGFBP01127 241 aaPredicted RBP25.81■■□□□ 1.72
C9orf47-202ENST00000375850 ASGR2P07307 311 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 CLCN5P51795 746 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 AFF1P51825 1210 aaKnown RBP25.81■■□□□ 1.72
C9orf47-202ENST00000375850 DSC1Q08554 894 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 ASTLQ6HA08 431 aaPredicted RBP25.81■■□□□ 1.72
C9orf47-202ENST00000375850 HDAC7Q8WUI4 952 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 TRIM6Q9C030 488 aaPredicted RBP25.81■■□□□ 1.72
C9orf47-202ENST00000375850 MFSD1Q9H3U5 465 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 XPNPEP1Q9NQW7 623 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 GJB4Q9NTQ9 266 aa25.81■■□□□ 1.72
C9orf47-202ENST00000375850 CTDNEP1O95476 244 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 SSBP05455 408 aaKnown RBP eCLIP25.8■■□□□ 1.72
C9orf47-202ENST00000375850 XRCC6P12956 609 aaKnown RBP eCLIP25.8■■□□□ 1.72
C9orf47-202ENST00000375850 OR1G1P47890 313 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 GLUD2P49448 558 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 CALCRLQ16602 461 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 KANK3Q6NY19 840 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 RNF168Q8IYW5 571 aaPredicted RBP25.8■■□□□ 1.72
C9orf47-202ENST00000375850 STAMQ92783 540 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 TNFRSF25Q93038 417 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 COLEC11Q9BWP8 271 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 RXFP1Q9HBX9 757 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 MARCH5Q9NX47 278 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 IGSF9Q9P2J2 1179 aa25.8■■□□□ 1.72
C9orf47-202ENST00000375850 DAXXQ9UER7 740 aaPredicted RBP25.8■■□□□ 1.72
C9orf47-202ENST00000375850 PRG3Q9Y2Y8 225 aaPredicted RBP25.8■■□□□ 1.72
C9orf47-202ENST00000375850 ARL2P36404 184 aa25.79■■□□□ 1.72
C9orf47-202ENST00000375850 MLH1P40692 756 aa25.79■■□□□ 1.72
C9orf47-202ENST00000375850 AK2P54819 239 aa25.79■■□□□ 1.72
C9orf47-202ENST00000375850 NR5A1Q13285 461 aa25.79■■□□□ 1.72
C9orf47-202ENST00000375850 TDGQ13569 410 aa25.79■■□□□ 1.72
C9orf47-202ENST00000375850 EARS2Q5JPH6 523 aaKnown RBP25.79■■□□□ 1.72
C9orf47-202ENST00000375850 GAD1Q99259 594 aa25.79■■□□□ 1.72
C9orf47-202ENST00000375850 EIF2AQ9BY44 585 aaKnown RBP25.79■■□□□ 1.72
C9orf47-202ENST00000375850 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.79■■□□□ 1.72
C9orf47-202ENST00000375850 CACNA1HO95180 2353 aa25.79■■□□□ 1.72
C9orf47-202ENST00000375850 PROB1E7EW31 1015 aa25.78■■□□□ 1.72
C9orf47-202ENST00000375850 ZBTB39O15060 712 aa25.78■■□□□ 1.72
C9orf47-202ENST00000375850 GFRA3O60609 400 aa25.78■■□□□ 1.72
C9orf47-202ENST00000375850 EIF5BO60841 1220 aaKnown RBP25.78■■□□□ 1.72
C9orf47-202ENST00000375850 EFEMP2O95967 443 aa25.78■■□□□ 1.72
C9orf47-202ENST00000375850 GLUD1P00367 558 aa25.78■■□□□ 1.72
C9orf47-202ENST00000375850 DSG1Q02413 1049 aa25.78■■□□□ 1.72
C9orf47-202ENST00000375850 MBTD1Q05BQ5 628 aa25.78■■□□□ 1.72
C9orf47-202ENST00000375850 TTC12Q9H892 705 aaPredicted RBP25.78■■□□□ 1.72
C9orf47-202ENST00000375850 MAN1C1Q9NR34 630 aa25.78■■□□□ 1.72
C9orf47-202ENST00000375850 C2CD2LO14523 706 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 TEX28O15482 410 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 NEMFO60524 1076 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 CREMQ03060 361 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 CAPSQ13938 189 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 TRIM29Q14134 588 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 KIAA0319Q5VV43 1072 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 TMEM105Q8N8V8 129 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 PLEKHA4Q9H4M7 779 aa25.77■■□□□ 1.72
C9orf47-202ENST00000375850 H0Y858 1186 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 PAPLNO95428 1278 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 FDPSP14324 419 aaKnown RBP25.76■■□□□ 1.71
C9orf47-202ENST00000375850 ARF4P18085 180 aaPredicted RBP25.76■■□□□ 1.71
C9orf47-202ENST00000375850 RARRES1P49788 294 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 SCNN1GP51170 649 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 AMHR2Q16671 573 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 SLC27A1Q6PCB7 646 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 GTF3C6Q969F1 213 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 CPB2Q96IY4 423 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 PRIMPOLQ96LW4 560 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 RNF39Q9H2S5 420 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 WDR6Q9NNW5 1121 aaKnown RBP25.76■■□□□ 1.71
C9orf47-202ENST00000375850 CHST7Q9NS84 486 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 FAM86C1Q9NVL1 165 aa25.76■■□□□ 1.71
C9orf47-202ENST00000375850 DUSP12Q9UNI6 340 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms