RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 ACKR2O00590 384 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 TEX33O43247 280 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 NRDCO43847 1150 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 STX10O60499 249 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 TOM1L1O75674 476 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 VTNP04004 478 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 PBX1P40424 430 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 CASP4P49662 377 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 GPC3P51654 580 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 MBTD1Q05BQ5 628 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 PTPN11Q06124 597 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-202ENST00000374339 ENPEPQ07075 957 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 BFSP1Q12934 665 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
PTPN20-202ENST00000374339 SNRNP35Q16560 246 aaKnown RBP10.58□□□□□ -0.72
PTPN20-202ENST00000374339 NBPF20Q3BBV1 942 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 SLC9C1Q4G0N8 1177 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 TCERG1LQ5VWI1 586 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 SRGAP1Q7Z6B7 1085 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 PPFIBP1Q86W92 1011 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 GPD1LQ8N335 351 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 CCDC150Q8NCX0 1101 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 CBWD1Q9BRT8 395 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 NUP58Q9BVL2 599 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 SEZ6LQ9BYH1 1024 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 INO80BQ9C086 356 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-202ENST00000374339 IKZF4Q9H2S9 585 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 FZD8Q9H461 694 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 PCIF1Q9H4Z3 704 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 IFT122Q9HBG6 1241 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 HDAC6Q9UBN7 1215 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 GTF2IRD1Q9UHL9 959 aa10.58□□□□□ -0.72
PTPN20-202ENST00000374339 A0A087WZ62 844 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 A0A0B4J269 797 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 TTLL13PA6NNM8 815 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 TISP43B9A030 160 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 KBTBD13C9JR72 458 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 CLDN3O15551 220 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 EXTL3O43909 919 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 N4BP1O75113 896 aaKnown RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 ERLIN2O94905 339 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 AFPP02771 609 aaKnown RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 GJB1P08034 283 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 SFPQP23246 707 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 ADSSP30520 456 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 MATR3P43243 847 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 ACLYP53396 1101 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 NLRP11P59045 1033 aaKnown RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 NCBP1Q09161 790 aaKnown RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 KCNH2Q12809 1159 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 TMEM132AQ24JP5 1023 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 DCAF17Q5H9S7 520 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 SLC39A4Q6P5W5 647 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 TSHZ1Q6ZSZ6 1077 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 CCDC186Q7Z3E2 898 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 APBB1IPQ7Z5R6 666 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 DNAJC5GQ8N7S2 189 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 SLC35C1Q96A29 364 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 ZBTB10Q96DT7 871 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 FBXL18Q96ME1 805 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
PTPN20-202ENST00000374339 ACO2Q99798 780 aaKnown RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 FDXACB1Q9BRP7 624 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 GCOM2Q9BZD3 368 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 FAM49AQ9H0Q0 323 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 AGO2Q9UKV8 859 aaKnown RBP10.57□□□□□ -0.72
PTPN20-202ENST00000374339 CNTNAP2Q9UHC6 1331 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 GTPBP10A4D1E9 387 aaKnown RBP10.56□□□□□ -0.72
PTPN20-202ENST00000374339 ZNF233A6NK53 670 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 M0QZ92 97 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 TREHO43280 583 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 TRIM21P19474 475 aaKnown RBP10.56□□□□□ -0.72
PTPN20-202ENST00000374339 VAMP7P51809 220 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 MCCD1P59942 119 aaPredicted RBP10.56□□□□□ -0.72
PTPN20-202ENST00000374339 CETN1Q12798 172 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 TBX2Q13207 712 aaPredicted RBP10.56□□□□□ -0.72
PTPN20-202ENST00000374339 SYCP1Q15431 976 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 KYAT1Q16773 422 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 KIZQ2M2Z5 673 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 FAM47CQ5HY64 1035 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 ATF7IP2Q5U623 682 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 MPZL3Q6UWV2 235 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 CNGA4Q8IV77 575 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 SH3TC2Q8TF17 1288 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 DNAJB3Q8WWF6 145 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 PCMTD1Q96MG8 357 aaPredicted RBP10.56□□□□□ -0.72
PTPN20-202ENST00000374339 TCHPQ9BT92 498 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 MSTO1Q9BUK6 570 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 TARS2Q9BW92 718 aaKnown RBP10.56□□□□□ -0.72
PTPN20-202ENST00000374339 ANKFY1Q9P2R3 1169 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 TNFSF13BQ9Y275 285 aa10.56□□□□□ -0.72
PTPN20-202ENST00000374339 OGTO15294 1046 aa10.55□□□□□ -0.72
PTPN20-202ENST00000374339 GPR32O75388 356 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms