RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 SHBGP04278 402 aa12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 RPS6P62753 249 aaKnown RBP12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 SLC18A3Q16572 532 aa12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 CEP55Q53EZ4 464 aa12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 FAM43BQ6ZT52 329 aaPredicted RBP12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 CCSER1Q9C0I3 900 aa12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 NSRP1Q9H0G5 558 aaKnown RBP12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 ETAA1Q9NY74 926 aa12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
RPRD1B-201ENST00000373433 TRAF5O00463 557 aa12.02□□□□□ -0.48
RPRD1B-201ENST00000373433 SMNDC1O75940 238 aaKnown RBP eCLIP12.02□□□□□ -0.48
RPRD1B-201ENST00000373433 GSTA1P08263 222 aa12.02□□□□□ -0.48
RPRD1B-201ENST00000373433 SNHG28P0DPA3 235 aa12.02□□□□□ -0.48
RPRD1B-201ENST00000373433 CCND2P30279 289 aa12.02□□□□□ -0.48
RPRD1B-201ENST00000373433 CDCA2Q69YH5 1023 aaPredicted RBP12.02□□□□□ -0.48
RPRD1B-201ENST00000373433 AZI2Q9H6S1 392 aa12.02□□□□□ -0.48
RPRD1B-201ENST00000373433 GPBP1L1Q9HC44 474 aaPredicted RBP12.02□□□□□ -0.48
RPRD1B-201ENST00000373433 LAMB2P55268 1798 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 PPP1R2P41236 205 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 JAG1P78504 1218 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 LACTBP83111 547 aaPredicted RBP12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 ASIC2Q16515 512 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 PEX26Q7Z412 305 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 GLG1Q92896 1179 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 OPTNQ96CV9 577 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 FAM20AQ96MK3 541 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 OSBPL1AQ9BXW6 950 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 DUOX1Q9NRD9 1551 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 IPO5O00410 1097 aaKnown RBP12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 NFIBO00712 420 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 SNUPNO95149 360 aaKnown RBP12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 MYBP10242 640 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 LRRC14Q15048 493 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 CCDC38Q502W7 563 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 MYCT1Q8N699 235 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 METTL13Q8N6R0 699 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 CUEDC2Q9H467 287 aa12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 GBA2Q9HCG7 927 aaPredicted RBP12.02□□□□□ -0.49
RPRD1B-201ENST00000373433 CACNA1SQ13698 1873 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 GOLGA6L10A0A0M3HER8 536 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 KLHL33A6NCF5 533 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 SLC37A4O43826 429 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ORC2Q13416 577 aaPredicted RBP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 CTTNQ14247 550 aaKnown RBP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 SLMAPQ14BN4 828 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 DENND2CQ68D51 928 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 CENPPQ6IPU0 288 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ZC3H15Q8WU90 426 aaKnown RBP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.491e-15■□□□□ 9
RPRD1B-201ENST00000373433 CEP72Q9P209 647 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 IRF6O14896 467 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 COPB2P35606 906 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 PRPHP41219 470 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ZNF157P51786 506 aaPredicted RBP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 HIRAP54198 1017 aaPredicted RBP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 RWDD2BP57060 319 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ATP11AP98196 1134 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 KCNMA1Q12791 1236 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 RIPK1Q13546 671 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ITIH4Q14624 930 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ANKRD20A2Q5SQ80 823 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ANKRD20A1Q5TYW2 823 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ANKRD20A3Q5VUR7 823 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 PBKQ96KB5 322 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 ZNF317Q96PQ6 595 aaPredicted RBP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 STK17AQ9UEE5 414 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 SYNPO2Q9UMS6 1093 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 CNTNAP1P78357 1384 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 CCL15-CCL14A0A0B4J2E2 113 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 DKC1O60832 514 aaKnown RBP eCLIP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 SMIM24O75264 130 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 PLTPP55058 493 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 IFI35P80217 286 aaPredicted RBP12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 CCL15Q16663 113 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 SCFD2Q8WU76 684 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 CLMNQ96JQ2 1002 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 MLXIPLQ9NP71 852 aa12.01□□□□□ -0.49
RPRD1B-201ENST00000373433 POTEB3A0JP26 581 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 POTECB2RU33 542 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 KRT16P08779 473 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 CCND1P24385 295 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 NCALDP61601 193 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 POTEBQ6S5H4 581 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 GLIS3Q8NEA6 775 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 TMEM59LQ9UK28 342 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 ASAP2O43150 1006 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 ZNF268Q14587 947 aaPredicted RBP12□□□□□ -0.49
RPRD1B-201ENST00000373433 XKR9Q5GH70 373 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 PIGOQ8TEQ8 1089 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 CDHR1Q96JP9 859 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 C7orf25Q9BPX7 421 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 BHMT2Q9H2M3 363 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 SLC5A4Q9NY91 659 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 TRIM33Q9UPN9 1127 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms