RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 RRP36Q96EU6 259 aaKnown RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 C8orf76Q96K31 380 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 ZNF396Q96N95 335 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 GLT8D2Q9H1C3 349 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 KIF9Q9HAQ2 790 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 RGL1Q9NZL6 768 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 N4BP1O75113 896 aaKnown RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 KIF5BP33176 963 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 ZNF131P52739 623 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 WDR5P61964 334 aaKnown RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 LMNB2Q03252 620 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 RNF180Q86T96 592 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 TMEM139Q8IV31 216 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 ANKRD35Q8N283 1001 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 DTNBP1Q96EV8 351 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 PBX4Q9BYU1 374 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 PSTPIP2Q9H939 334 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 TRPV5Q9NQA5 729 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 HDAC6Q9UBN7 1215 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 MYO6Q9UM54 1294 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 B4GALT3O60512 393 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 PARNO95453 639 aaKnown RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 EPB41P11171 864 aaKnown RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 METAP2P50579 478 aaKnown RBP eCLIP7.51□□□□□ -1.211e-12■□□□□ 10.3
CSDE1-204ENST00000369530 RESTQ13127 1097 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 PPFIA1Q13136 1202 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 PSMD2Q13200 908 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 MYBPC2Q14324 1141 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 FBXO47Q5MNV8 452 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 C6orf89Q6UWU4 347 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 DPP9Q86TI2 863 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 GIMAP8Q8ND71 665 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 HDAC7Q8WUI4 952 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 ANKRD27Q96NW4 1050 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 TSPYL2Q9H2G4 693 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 TMEM60Q9H2L4 133 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 ACTR5Q9H9F9 607 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 RGS18Q9NS28 235 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 SLC12A7Q9Y666 1083 aa7.51□□□□□ -1.21
CSDE1-204ENST00000369530 V9GY48 417 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-204ENST00000369530 SPDYE3A6NKU9 549 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 GOLGA8AA7E2F4 631 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 MAFO75444 373 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-204ENST00000369530 C7P10643 843 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 STX1AQ16623 288 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 CXCL17Q6UXB2 119 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 CKAP2LQ8IYA6 745 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 KCTD17Q8N5Z5 321 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 CUL5Q93034 780 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 LRCH3Q96II8 777 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 NTPCRQ9BSD7 190 aaKnown RBP7.5□□□□□ -1.21
CSDE1-204ENST00000369530 HTATIP2Q9BUP3 242 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 TNMDQ9H2S6 317 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 TRMT1Q9NXH9 659 aaKnown RBP7.5□□□□□ -1.21
CSDE1-204ENST00000369530 TREHO43280 583 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 DGKIO75912 1065 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 FERP16591 822 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 CLNS1AP54105 237 aaKnown RBP7.5□□□□□ -1.21
CSDE1-204ENST00000369530 NAALADL2Q58DX5 795 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 CMPK2Q5EBM0 449 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 ZNF618Q5T7W0 954 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 HHATQ5VTY9 493 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 FAM81AQ8TBF8 368 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 TOP1MTQ969P6 601 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 ALS2CR12Q96Q35 445 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 ELAC1Q9H777 363 aaKnown RBP7.5□□□□□ -1.21
CSDE1-204ENST00000369530 SLC39A2Q9NP94 309 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 RAD21O60216 631 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 CUTAO60888 179 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 RNF40O75150 1001 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 GCKP35557 465 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 CCNG1P51959 295 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 ACTR2P61160 394 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 STK38Q15208 465 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 USH1GQ495M9 461 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 C4orf19Q8IY42 314 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 ATP8B4Q8TF62 1192 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 RUBCNQ92622 972 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 MTRQ99707 1265 aa7.5□□□□□ -1.21
CSDE1-204ENST00000369530 DBR1Q9UK59 544 aaKnown RBP7.5□□□□□ -1.21
CSDE1-204ENST00000369530 SMCO2A6NFE2 343 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 ZSCAN12O43309 604 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 PYGBP11216 843 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 ERVK-21P61565 698 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 RIPK1Q13546 671 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 DGKDQ16760 1214 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 C1orf131Q8NDD1 294 aaKnown RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 BICD1Q96G01 975 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 PNMA5Q96PV4 448 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 POLR3CQ9BUI4 534 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 HAPLN2Q9GZV7 340 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 SCAND2PQ9GZW5 306 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 SEMA6BQ9H3T3 888 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 AGO3Q9H9G7 860 aaKnown RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 PCDHA11Q9Y5I1 949 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 C9IYK1 514 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 TBC1D4O60343 1298 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 TDP2O95551 362 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 TXNP10599 105 aaKnown RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 DNAJB1P25685 340 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms