RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 C7orf43Q8WVR3 580 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 SLCO2A1Q92959 643 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 RPS6KC1Q96S38 1066 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 STK33Q9BYT3 514 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 CPVLQ9H3G5 476 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 TYW1Q9NV66 732 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 WHRNQ9P202 907 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 DDX25Q9UHL0 483 aaKnown RBP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
LYSMD1-201ENST00000368908 PEX5P50542 639 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 RAD23BP54727 409 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 SLC12A3P55017 1021 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 MXRA7P84157 204 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 STRN3Q13033 797 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 ZNF211Q13398 564 aaPredicted RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 SEL1L2Q5TEA6 688 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 TTC27Q6P3X3 843 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 CCDC137Q6PK04 289 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 PPP1R21Q6ZMI0 780 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 GLYCTKQ8IVS8 523 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 DHX36Q9H2U1 1008 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 CDC42EP4Q9H3Q1 356 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 NKX1-2Q9UD57 310 aaPredicted RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 E9PMD0 336 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 AP1G2O75843 785 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 RTN3O95197 1032 aaPredicted RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 GNAT1P11488 350 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 ALDH3A1P30838 453 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 COILP38432 576 aaPredicted RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 CLK2P49760 499 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 YARSP54577 528 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 SETDB1Q15047 1291 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 NFIL3Q16649 462 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 DCAF17Q5H9S7 520 aaPredicted RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 MTHFD1LQ6UB35 978 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 ADAT2Q7Z6V5 191 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 DZIP1Q86YF9 867 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 UHMK1Q8TAS1 419 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 MGARPQ8TDB4 240 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 ARHGEF26Q96DR7 871 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 MTUS1Q9ULD2 1270 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 PCDHA12Q9UN75 941 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 MTMR7Q9Y216 660 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
LYSMD1-201ENST00000368908 MPHOSPH10O00566 681 aaKnown RBP11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 MAGEB2O15479 319 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 SMIM24O75264 130 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 AKAP3O75969 853 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 NR3C1P04150 777 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 STX2P32856 288 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 KLC1Q07866 573 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 CALCOCO2Q13137 446 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 LONRF1Q17RB8 773 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 KCTD19Q17RG1 926 aaPredicted RBP11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 IRGCQ6NXR0 463 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 USP17L2Q6R6M4 530 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 CNBD1Q8NA66 436 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 ASTN1O14525 1302 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 NPHP3-ACAD11A0A0J9YXS1 232 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 TRAFD1O14545 582 aaPredicted RBP11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 MTA2O94776 668 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 KRT18P05783 430 aaKnown RBP11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 PLCG2P16885 1265 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 HOXD13P35453 343 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 PCK1P35558 622 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 CASP5P51878 434 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 PPP4CP60510 307 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 KIF22Q14807 665 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 NFIXQ14938 502 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 RHBDF2Q6PJF5 856 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 C16orf86Q6ZW13 317 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 BORCS6Q96GS4 357 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 TRAPPC9Q96Q05 1148 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 WNT8AQ9H1J5 351 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 VCXQ9H320 206 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 NKIRAS1Q9NYS0 192 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 COG5Q9UP83 839 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 ALG6Q9Y672 507 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 USH1CQ9Y6N9 552 aa11.28□□□□□ -0.6
LYSMD1-201ENST00000368908 WTIPA6NIX2 430 aaPredicted RBP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 HNRNPCL1O60812 293 aaKnown RBP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 DCTN3O75935 186 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 MMP10P09238 476 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 BRAFP15056 766 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 TAC1P20366 129 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 TNFAIP3P21580 790 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 RFX1P22670 979 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 SSR1P43307 286 aaKnown RBP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 TNNI2P48788 182 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 RASSF2P50749 326 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms