RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SLC24A3Q9HC58 644 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 SDC4P31431 198 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 ACTN3Q08043 901 aaPredicted RBP19.27■□□□□ 0.68
SNX27-202ENST00000368841 MORF4L2Q15014 288 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 IL31Q6EBC2 164 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 STAG2Q8N3U4 1231 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 XXYLT1Q8NBI6 393 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 BTBD6Q96KE9 485 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 RNF123Q5XPI4 1314 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 KDM5DQ9BY66 1539 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 USP27XA6NNY8 438 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 ASNSP08243 561 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 ALS2CLQ60I27 953 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 OR6J1Q8NGC5 347 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 PGBD4Q96DM1 585 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 SKIP12755 728 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 CHRNA5P30532 468 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 CUL3Q13618 768 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 TTLL4Q14679 1199 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 WDR75Q8IWA0 830 aaKnown RBP19.27■□□□□ 0.68
SNX27-202ENST00000368841 RHOT2Q8IXI1 618 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 EIF2AK1Q9BQI3 630 aaKnown RBP19.27■□□□□ 0.68
SNX27-202ENST00000368841 DYRK4Q9NR20 520 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 TOPORSQ9NS56 1045 aaPredicted RBP19.27■□□□□ 0.68
SNX27-202ENST00000368841 HOXC10Q9NYD6 342 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 RBAKQ9NYW8 714 aaPredicted RBP19.27■□□□□ 0.68
SNX27-202ENST00000368841 ELMSAN1Q6PJG2 1045 aa19.27■□□□□ 0.67
SNX27-202ENST00000368841 STRBPQ96SI9 672 aaKnown RBP19.27■□□□□ 0.67
SNX27-202ENST00000368841 EPAS1Q99814 870 aa19.27■□□□□ 0.67
SNX27-202ENST00000368841 RCOR1Q9UKL0 485 aa19.27■□□□□ 0.67
SNX27-202ENST00000368841 ZNF185O15231 689 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 BTBD8Q5XKL5 378 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 TMEM35BQ8NCS4 154 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 RBM41Q96IZ5 413 aaKnown RBP19.26■□□□□ 0.67
SNX27-202ENST00000368841 POLRMTO00411 1230 aaKnown RBP19.26■□□□□ 0.67
SNX27-202ENST00000368841 PFKFB3Q16875 520 aaPredicted RBP19.26■□□□□ 0.67
SNX27-202ENST00000368841 ENAHQ8N8S7 591 aaPredicted RBP19.26■□□□□ 0.67
SNX27-202ENST00000368841 YIPF3Q9GZM5 350 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 AIPL1Q9NZN9 384 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 SLC9A2Q9UBY0 812 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 SHANK2Q9UPX8 1470 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 KCNN4O15554 427 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 GRAP2O75791 330 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 PDGFRBP09619 1106 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 ZBTB17Q13105 803 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 MTMR2Q13614 643 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 GRAMD4Q6IC98 578 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 ARHGEF25Q86VW2 580 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 ADGRA2Q96PE1 1338 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 ZC3H4Q9UPT8 1303 aaKnown RBP19.26■□□□□ 0.67
SNX27-202ENST00000368841 RNF103-CHMP3A0A140T963 221 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 DCTN3O75935 186 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 TMCC1O94876 653 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 LRRC74AQ0VAA2 488 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 CUL1Q13616 776 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 SEL1LQ9UBV2 794 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 ADGRL2O95490 1459 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 SPDYE5A6NIY4 337 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 SMARCA1P28370 1054 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 SPDYE7PQ495Y7 208 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 EFHC2Q5JST6 749 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 EMSYQ7Z589 1322 aa19.26■□□□□ 0.67
SNX27-202ENST00000368841 KPNA7A9QM74 516 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 AARSP49588 968 aaKnown RBP eCLIP19.25■□□□□ 0.67
SNX27-202ENST00000368841 SPATS2LQ9NUQ6 558 aaKnown RBP19.25■□□□□ 0.67
SNX27-202ENST00000368841 HMGB1P1B2RPK0 211 aaPredicted RBP19.25■□□□□ 0.67
SNX27-202ENST00000368841 F8W8V4 182 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 CYP26A1O43174 497 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 CDH6P55285 790 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 SESN2P58004 480 aaPredicted RBP19.25■□□□□ 0.67
SNX27-202ENST00000368841 TMCO5AQ8N6Q1 288 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 TMEM143Q96AN5 459 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 ARHGAP26Q9UNA1 814 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 CPDO75976 1380 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 CSE1LP55060 971 aaKnown RBP19.25■□□□□ 0.67
SNX27-202ENST00000368841 SCG3Q8WXD2 468 aaKnown RBP19.25■□□□□ 0.67
SNX27-202ENST00000368841 MID2Q9UJV3 735 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 CHRNA3P32297 505 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 CENPAP49450 140 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 PRMT1Q99873 361 aaKnown RBP19.25■□□□□ 0.67
SNX27-202ENST00000368841 ARIH2O95376 493 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 ABCD1P33897 745 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 KNOP1Q1ED39 458 aaKnown RBP19.25■□□□□ 0.67
SNX27-202ENST00000368841 TUBB6Q9BUF5 446 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 MAGI2Q86UL8 1455 aa19.25■□□□□ 0.67
SNX27-202ENST00000368841 ZNF235Q14590 738 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 LRRC36Q1X8D7 754 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 FSCBQ5H9T9 825 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 FOXP4Q8IVH2 680 aaPredicted RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 MRPL4Q9BYD3 311 aaKnown RBP19.24■□□□□ 0.67
SNX27-202ENST00000368841 MRFAP1Q9Y605 127 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 V9GYQ6 96 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 SYNGAP1Q96PV0 1343 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 IFNA8P32881 189 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 PPP4R3CPQ6ZMV5 832 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 SIRT2Q8IXJ6 389 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 SLC25A41Q8N5S1 370 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 TMEM60Q9H2L4 133 aa19.24■□□□□ 0.67
SNX27-202ENST00000368841 VCAM1P19320 739 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms