RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 MAEAQ7L5Y9 396 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MICALL2Q8IY33 904 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF512Q96ME7 567 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 C20orf96Q9NUD7 363 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SH3GLB1Q9Y371 365 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TADA3O75528 432 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 WEE2P0C1S8 567 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 POLR2MP0CAP2 368 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MCF2P10911 925 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SLC12A1Q13621 1099 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 KRT81Q14533 505 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 METTL21CQ5VZV1 264 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CREB3L3Q68CJ9 461 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SHOX2O60902 331 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MFSD6Q6ZSS7 791 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MYOCDQ8IZQ8 938 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SLC35F6Q8N357 371 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NEDD1Q8NHV4 660 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 GPAMQ9HCL2 828 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PCSK1NQ9UHG2 260 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 FADS2O95864 444 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ERBB2P04626 1255 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CYP2C9P11712 490 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 DSG1Q02413 1049 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 WDR44Q5JSH3 913 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CCDC36Q8IYA8 594 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF532Q9HCE3 1301 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ITGALP20701 1170 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 RPL19P84098 196 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 OSCP1Q8WVF1 389 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MAGED1Q9Y5V3 778 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MRFAP1Q9Y605 127 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NEO1Q92859 1461 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NCAM2O15394 837 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 STIP1P31948 543 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PSMC4P43686 418 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ANO6Q4KMQ2 910 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MIGA1Q8NAN2 632 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SLC6A7Q99884 636 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 H3BUI4 141 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 LRRC38Q5VT99 294 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NLRP10Q86W26 655 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 RBM12BQ8IXT5 1001 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CCDC33Q8N5R6 958 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 DNAJC7Q99615 494 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TUBA1CQ9BQE3 449 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 UNC45AQ9H3U1 944 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 DDX18Q9NVP1 670 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 LAMC3Q9Y6N6 1575 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 BACH1O14867 736 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 LONRF2Q1L5Z9 754 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TNIP3Q96KP6 325 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ARHGEF10LQ9HCE6 1279 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PRDM4Q9UKN5 801 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 COL4A3BPQ9Y5P4 624 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NPTXRO95502 500 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 HSPD1P10809 573 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PTGS2P35354 604 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM44Q2T9K0 475 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 FAM47AQ5JRC9 791 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 KIF2BQ8N4N8 673 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SERPINB12Q96P63 405 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 USP1O94782 785 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PRKAR2BP31323 418 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ANO4Q32M45 955 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 RASGRP2Q7LDG7 609 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ATP11CQ8NB49 1132 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM109Q9BVC6 243 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 INTS9Q9NV88 658 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ZFATQ9P243 1243 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 USTQ9Y2C2 406 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NFAT5O94916 1531 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SYF2O95926 243 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 EXOC3L4Q17RC7 722 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ANKMY2Q8IV38 441 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PRELID1Q9Y255 219 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 EFCAB6Q5THR3 1501 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TGDSO95455 350 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SDSP20132 328 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 COPB1P53618 953 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 INSCQ1MX18 579 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SDE2Q6IQ49 451 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 KDM7AQ6ZMT4 941 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CDR2LQ86X02 465 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 DCLK2Q8N568 766 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PTTG2Q9NZH5 202 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 GNAT3A8MTJ3 354 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 POLE2P56282 527 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ZC3H6P61129 1189 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 RTN1Q16799 776 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ADAT2Q7Z6V5 191 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ERICH1Q86X53 443 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 MAPKAPK5Q8IW41 473 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SMNDC1O75940 238 aaKnown RBP eCLIP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 STRIP1Q5VSL9 837 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PCYOX1LQ8NBM8 494 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NESP48681 1621 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 GJC1P36383 396 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ACMSDQ8TDX5 336 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms