RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RHOT1Q8IXI2 618 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCAF1-201ENST00000360565 GABPB2Q8TAK5 448 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-201ENST00000360565 ACER1Q8TDN7 264 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 PSPC1Q8WXF1 523 aaKnown RBP17.44■□□□□ 0.38
SCAF1-201ENST00000360565 PCSK1NQ9UHG2 260 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 EVX2Q03828 476 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 DPY19L2Q6NUT2 758 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 PDZD4Q76G19 769 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-201ENST00000360565 AGBL1Q96MI9 1066 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 POLR3CQ9BUI4 534 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-201ENST00000360565 A0A0U1RQJ8 604 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 PON1P27169 355 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 ACOT2P49753 483 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 HMGCS2P54868 508 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 FAM151AQ8WW52 585 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 CHMP6Q96FZ7 201 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 CCT8L2Q96SF2 557 aa17.44■□□□□ 0.38
SCAF1-201ENST00000360565 ZNF70Q9UC06 446 aaPredicted RBP17.44■□□□□ 0.38
SCAF1-201ENST00000360565 TCHHQ07283 1943 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 EIF3DO15371 548 aaKnown RBP eCLIP17.43■□□□□ 0.38
SCAF1-201ENST00000360565 ZBED1O96006 694 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 TMEM253P0C7T8 217 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 PPP6R3Q5H9R7 873 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-201ENST00000360565 RAB3IL1Q8TBN0 382 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 PNMA5Q96PV4 448 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 AGPAT3Q9NRZ7 376 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 KCND2Q9NZV8 630 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 ZBTB22O15209 634 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 ECE1P42892 770 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 KRT17Q04695 432 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 MTMR2Q13614 643 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 ZNF568Q3ZCX4 644 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 RIT2Q99578 217 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.43■□□□□ 0.38
SCAF1-201ENST00000360565 C3P01024 1663 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 ATMINO43313 823 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-201ENST00000360565 CALB1P05937 261 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 TBXAS1P24557 533 aaPredicted RBP17.43■□□□□ 0.38
SCAF1-201ENST00000360565 KCNJ1P48048 391 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 SEC24CP53992 1094 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 CCNA1P78396 465 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 GIT2Q14161 759 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 PHLDB3Q6NSJ2 640 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 MXRA8Q9BRK3 442 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 TMEM39BQ9GZU3 492 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 KCNH7Q9NS40 1196 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 COPB2P35606 906 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 CAV1Q03135 178 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 SPARCL1Q14515 664 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 MTMR8Q96EF0 704 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 ACAD9Q9H845 621 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 SLC9A2Q9UBY0 812 aa17.43■□□□□ 0.38
SCAF1-201ENST00000360565 FRMD3A2A2Y4 597 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 GPS1Q13098 491 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 BYSLQ13895 437 aaKnown RBP17.42■□□□□ 0.38
SCAF1-201ENST00000360565 DNAAF5Q86Y56 855 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 TPCN2Q8NHX9 752 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 IFT122Q9HBG6 1241 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 SLC38A10Q9HBR0 1119 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 JPH1Q9HDC5 661 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-201ENST00000360565 SLC5A4Q9NY91 659 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 DDTLA6NHG4 134 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-201ENST00000360565 WNT7AO00755 349 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 AKAP3O75969 853 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 GGPS1O95749 300 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 COMTP21964 271 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 LSP1P33241 339 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 HVCN1Q96D96 273 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 VCXQ9H320 206 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 BLOC1S4Q9NUP1 217 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 NUB1Q9Y5A7 615 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 CRCPO75575 148 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 NR3C2P08235 984 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 PRLRP16471 622 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 ARL4AP40617 200 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 PSMC6P62333 389 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 MYO1EQ12965 1108 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 Q3C1V9 767 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 SLC30A10Q6XR72 485 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 EPM2AIP1Q7L775 607 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-201ENST00000360565 CPA5Q8WXQ8 436 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 PRMT6Q96LA8 375 aaPredicted RBP17.42■□□□□ 0.38
SCAF1-201ENST00000360565 EPN3Q9H201 632 aa17.42■□□□□ 0.38
SCAF1-201ENST00000360565 UBE4BO95155 1302 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 PI4K2BG5E9Z4 385 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 FOXP2O15409 715 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 DGAT1O75907 488 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 SASH3O75995 380 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 ARL4CP56559 192 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 GRIK5Q16478 980 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 IZUMO3Q5VZ72 239 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 JAMLQ86YT9 394 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 ISCUQ9H1K1 167 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 KCND1Q9NSA2 647 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 UVRAGQ9P2Y5 699 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 FBXO40Q9UH90 709 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 WDR46O15213 610 aaKnown RBP17.41■□□□□ 0.38
SCAF1-201ENST00000360565 XPOTO43592 962 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms