RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 DCDC2BA2VCK2 349 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 FAM170BA6NMN3 283 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 TGM5O43548 720 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 SFPQP23246 707 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 WDR44Q5JSH3 913 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 PARM1Q6UWI2 310 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 GLB1LQ6UWU2 654 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 CAMKK1Q8N5S9 505 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 SLC5A5Q92911 643 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 RRP36Q96EU6 259 aaKnown RBP6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 FAM227BQ96M60 508 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 FOXQ1Q9C009 403 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 NRP1O14786 923 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 TCF3P15923 654 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 FGFR3P22607 806 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 HOXA11P31270 313 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 HOXD12P35452 270 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 GPC5P78333 572 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 FAM187BQ17R55 369 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 RAB44Q7Z6P3 723 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 GLRX5Q86SX6 157 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 NPAS3Q8IXF0 933 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 BEST2Q8NFU1 509 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 URGCPQ8TCY9 931 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 JPH2Q9BR39 696 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 ZMYM5Q9UJ78 669 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 GTF3C3Q9Y5Q9 886 aa6.78□□□□□ -1.32
CDC42SE2-201ENST00000360515 ABLIM3O94929 683 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 OATP04181 439 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 TMOD1P28289 359 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 KIF5BP33176 963 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 IMMTQ16891 758 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 XKR4Q5GH76 650 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 POTEHQ6S545 545 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 SMG7Q92540 1137 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 DUSP9Q99956 384 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 GCOM2Q9BZD3 368 aaPredicted RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 IFT122Q9HBG6 1241 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 TRIM6-TRIM34B2RNG4 842 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 ASAP2O43150 1006 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 EDIL3O43854 480 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 URODP06132 367 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 PSAPP07602 524 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 KLRC2P26717 231 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 CCINQ13939 588 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 MRPL58Q14197 206 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 STPG1Q5TH74 334 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 ABI1Q8IZP0 508 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 FAM160A2Q8N612 972 aaPredicted RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 SMG8Q8ND04 991 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 GSTCDQ8NEC7 633 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 SMARCC2Q8TAQ2 1214 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 WBP1Q96G27 269 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 GPR88Q9GZN0 384 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 PSTPIP2Q9H939 334 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 MTRRQ9UBK8 725 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 ALDH2P05091 517 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 JAK3P52333 1124 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 ANTXR2P58335 489 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 KARSQ15046 597 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 Q4G0T1 1027 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 SPOUT1Q5T280 376 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 CACNA2D4Q7Z3S7 1137 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 OSMRQ99650 979 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 PCDHA10Q9Y5I2 948 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 CEP192Q8TEP8 1941 aa6.77□□□□□ -1.33
CDC42SE2-201ENST00000360515 USP41Q3LFD5 358 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 TMTC3Q6ZXV5 915 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 LNX1Q8TBB1 728 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 FGF13Q92913 245 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 TMEM87BQ96K49 555 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 PHF20Q9BVI0 1012 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 B4E1Z4 1266 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 ELAVL2Q12926 359 aaKnown RBP6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 GRIK3Q13003 919 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 AMHR2Q16671 573 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 TMEM266Q2M3C6 531 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 SLC8B1Q6J4K2 584 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 KANK3Q6NY19 840 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 RALGPS2Q86X27 583 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 SMC5Q8IY18 1101 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 CACTIN-AS1Q8N1I8 211 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 GLIS3Q8NEA6 775 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 TRAPPC12Q8WVT3 735 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 MAP7D2Q96T17 732 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 FAM49AQ9H0Q0 323 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZNF334Q9HCZ1 680 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 KIAA1522Q9P206 1035 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 DNAJB4Q9UDY4 337 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 RAB23Q9ULC3 237 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 CNTNAP5Q8WYK1 1306 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 MYO7AQ13402 2215 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 CACNA1BQ00975 2339 aa6.76□□□□□ -1.33
CDC42SE2-201ENST00000360515 CHADO15335 359 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 XYLBO75191 536 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 GAS6Q14393 721 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms