RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 TRIM66O15016 1216 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ADCY3O60266 1144 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 HEMGNQ9BXL5 484 aa12.18□□□□□ -0.46
SPTBN1-202ENST00000356805 ZNF521Q96K83 1311 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 A2MP01023 1474 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 WDR47O94967 919 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 CD2BP2O95400 341 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 TCF3P15923 654 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 PLCG1P19174 1290 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 IREB2P48200 963 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 ZNF699Q32M78 642 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 CATSPER4Q7RTX7 472 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 KDELC2Q7Z4H8 507 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 WDR19Q8NEZ3 1342 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 LSP1P33241 339 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 RCAN1P53805 252 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 STAT4Q14765 748 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 RAB42Q8N4Z0 105 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 ATP11BQ9Y2G3 1177 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 BRAFP15056 766 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 CAPZA2P47755 286 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 PKN3Q6P5Z2 889 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 FAM161BQ96MY7 647 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 PIGSQ96S52 555 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 AURKCQ9UQB9 309 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 XDHP47989 1333 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 LIFRP42702 1097 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 DYNLL1P63167 89 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 CCDC142Q17RM4 750 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 FAM47EQ6ZV65 393 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 TRPM8Q7Z2W7 1104 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 HNRNPH1P31943 449 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 CYP27A1Q02318 531 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 MFN1Q8IWA4 741 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 YAF2Q8IY57 180 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 GREM2Q9H772 168 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 ATP10DQ9P241 1426 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 GUCA1CO95843 209 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 FLAD1Q8NFF5 587 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 SMAD5Q99717 465 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 EMILIN3Q9NT22 766 aa12.17□□□□□ -0.46
SPTBN1-202ENST00000356805 SUPT3HO75486 399 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 FBXW10Q5XX13 1052 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 AIPL1Q9NZN9 384 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 GNAT1P11488 350 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 MAP4P27816 1152 aaKnown RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 CDC25AP30304 524 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 ZNF341Q9BYN7 854 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 C6orf203Q9P0P8 240 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 MAGEA13PA6NCF6 341 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 SERPINB1P30740 379 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 PPP3CCP48454 512 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 LAMB3Q13751 1172 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 ZMYM1Q5SVZ6 1142 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 PIGOQ8TEQ8 1089 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 IL17RAQ96F46 866 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 TRPC7Q9HCX4 862 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 SUGP1Q8IWZ8 645 aaKnown RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 CMTM5Q96DZ9 223 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 OSBPL10Q9BXB5 764 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 TRIM54Q9BYV2 358 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 RGL1Q9NZL6 768 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 PCDHGB4Q9UN71 923 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 MYOM2P54296 1465 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 PTPRTO14522 1441 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 ANKRD65E5RJM6 399 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 SERPINB3P29508 390 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 VHLP40337 213 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 PHKA1P46020 1223 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 PRAMEP78395 509 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 FASTKD1Q53R41 847 aaKnown RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 KCNK16Q96T55 309 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 PARVBQ9HBI1 364 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 AP4S1Q9Y587 144 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 CDH16O75309 829 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 IL10P22301 178 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 PGM1P36871 562 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 ANKRD40Q6AI12 368 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 SPATA4Q8NEY3 305 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 ARL8AQ96BM9 186 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 ZNF496Q96IT1 587 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 EML4Q9HC35 981 aaKnown RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 LZTS1Q9Y250 596 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 MAP3K15Q6ZN16 1313 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 KRT16P08779 473 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 CACNB2Q08289 660 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 HORMAD1Q86X24 394 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 RAD18Q9NS91 495 aa12.16□□□□□ -0.46
SPTBN1-202ENST00000356805 CCT8L1PA6NM43 557 aa12.15□□□□□ -0.46
SPTBN1-202ENST00000356805 HUS1O60921 280 aa12.15□□□□□ -0.46
SPTBN1-202ENST00000356805 SNUPNO95149 360 aaKnown RBP12.15□□□□□ -0.46
SPTBN1-202ENST00000356805 KRT7P08729 469 aa12.15□□□□□ -0.46
SPTBN1-202ENST00000356805 ATP1A3P13637 1013 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms