RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 SYAP1Q96A49 352 aaPredicted RBP17.55■□□□□ 0.4
FDPS-201ENST00000356657 RNPC3Q96LT9 517 aaKnown RBP17.55■□□□□ 0.4
FDPS-201ENST00000356657 CGNQ9P2M7 1197 aaKnown RBP17.55■□□□□ 0.4
FDPS-201ENST00000356657 PCDHA5Q9Y5H7 936 aa17.55■□□□□ 0.4
FDPS-201ENST00000356657 SLC4A7Q9Y6M7 1214 aa17.55■□□□□ 0.4
FDPS-201ENST00000356657 C9IYK1 514 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 ENPP3O14638 875 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 HOXA2O43364 376 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 EOMESO95936 686 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 FGFR4P22455 802 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 SARSP49591 514 aaKnown RBP17.54■□□□□ 0.4
FDPS-201ENST00000356657 KYAT1Q16773 422 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 SKOR2Q2VWA4 1001 aaPredicted RBP17.54■□□□□ 0.4
FDPS-201ENST00000356657 COBLL1Q53SF7 1204 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 SLFN12LQ6IEE8 588 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 ZNF507Q8TCN5 953 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 GPT2Q8TD30 523 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 BICD1Q96G01 975 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 ACO2Q99798 780 aaKnown RBP17.54■□□□□ 0.4
FDPS-201ENST00000356657 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
FDPS-201ENST00000356657 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 KIAA1468Q9P260 1216 aa17.54■□□□□ 0.4
FDPS-201ENST00000356657 TRIOBPQ9H2D6 2365 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 ZBBXA8MT70 800 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 LIG4P49917 911 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 FXR1P51114 621 aaKnown RBP eCLIP17.53■□□□□ 0.42e-8■■□□□ 13.1
FDPS-201ENST00000356657 FAM189BP81408 668 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 NPAS4Q8IUM7 802 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 GOLGA5Q8TBA6 731 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 PGBD4Q96DM1 585 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 UBN1Q9NPG3 1134 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 FAM105AQ9NUU6 356 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 TBC1D7Q9P0N9 293 aa17.53■□□□□ 0.4
FDPS-201ENST00000356657 COL4A6Q14031 1691 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.52■□□□□ 0.4
FDPS-201ENST00000356657 KIAA0391O15091 583 aaKnown RBP17.52■□□□□ 0.4
FDPS-201ENST00000356657 B4GALT5O43286 388 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 MGEA5O60502 916 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 MCF2P10911 925 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 PROZP22891 400 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 KLHL40Q2TBA0 621 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 ZC2HC1CQ53FD0 456 aaPredicted RBP17.52■□□□□ 0.4
FDPS-201ENST00000356657 ZNF658Q5TYW1 1059 aaPredicted RBP17.52■□□□□ 0.4
FDPS-201ENST00000356657 MPZL3Q6UWV2 235 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 MYOCDQ8IZQ8 938 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 GUF1Q8N442 669 aaKnown RBP17.52■□□□□ 0.4
FDPS-201ENST00000356657 LINC01599Q8WXQ3 324 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 PDZD7Q9H5P4 517 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 PTPRHQ9HD43 1115 aa17.52■□□□□ 0.4
FDPS-201ENST00000356657 CLDN3O15551 220 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 MYBP10242 640 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 CASP5P51878 434 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 MCL1Q07820 350 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 STK4Q13043 487 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 STIM1Q13586 685 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 NOLC1Q14978 699 aaKnown RBP eCLIP17.51■□□□□ 0.395e-6■□□□□ 8.1
FDPS-201ENST00000356657 SHHQ15465 462 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 ZNF568Q3ZCX4 644 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 C9orf50Q5SZB4 431 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 HS2ST1Q7LGA3 356 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 SYCP3Q8IZU3 236 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 KIAA0895Q8NCT3 520 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 TOP1MTQ969P6 601 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 TARS2Q9BW92 718 aaKnown RBP17.51■□□□□ 0.39
FDPS-201ENST00000356657 GBP3Q9H0R5 595 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 SLC39A2Q9NP94 309 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 STYXL1Q9Y6J8 313 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 PTPRSQ13332 1948 aa17.51■□□□□ 0.39
FDPS-201ENST00000356657 ATP2A2P16615 1042 aaKnown RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 GARTP22102 1010 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 POU5F1Q01860 360 aaKnown RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 TCTN1Q2MV58 587 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 CCDC183Q5T5S1 534 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 MRPL10Q7Z7H8 261 aaKnown RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 RTN4RL1Q86UN2 441 aaPredicted RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 ECHDC2Q86YB7 292 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 CRIPAKQ8N1N5 446 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 TMEM174Q8WUU8 243 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 SCFD1Q8WVM8 642 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 CPB2Q96IY4 423 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 TCHPQ9BT92 498 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 LRFN2Q9ULH4 789 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 PCDHB7Q9Y5E2 793 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 PCDHB2Q9Y5E7 798 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 CITO14578 2027 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 CAMK4Q16566 473 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 KNOP1Q1ED39 458 aaKnown RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 UBXN11Q5T124 520 aa17.5■□□□□ 0.39
FDPS-201ENST00000356657 RBM43Q6ZSC3 357 aaKnown RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 ZNF598Q86UK7 904 aaKnown RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 CXXC1Q9P0U4 656 aaPredicted RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.5■□□□□ 0.39
FDPS-201ENST00000356657 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 PRPF6O94906 941 aaKnown RBP17.49■□□□□ 0.39
FDPS-201ENST00000356657 GJB5O95377 273 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 EDN1P05305 212 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 MORC3Q14149 939 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 LRIT3Q3SXY7 679 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 FOXR2Q6PJQ5 311 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 HERC6Q8IVU3 1022 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms