RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 DAAM2Q86T65 1068 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 ANKRD42Q8N9B4 389 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 MASTLQ96GX5 879 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 INPP4AQ96PE3 977 aaPredicted RBP10.08□□□□□ -0.8
SMG6-202ENST00000354901 EIF2AK1Q9BQI3 630 aaKnown RBP10.08□□□□□ -0.8
SMG6-202ENST00000354901 SH2D3AQ9BRG2 576 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 PAGR1Q9BTK6 254 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 TSPYL2Q9H2G4 693 aaPredicted RBP10.08□□□□□ -0.8
SMG6-202ENST00000354901 PCMTD2Q9NV79 361 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 NAGPAQ9UK23 515 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 RBAK-RBAKDNI3L0D1 243 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 OATP04181 439 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 ITGA4P13612 1032 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 ECE1P42892 770 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 ITIH3Q06033 890 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 DHX9Q08211 1270 aaKnown RBP10.08□□□□□ -0.8
SMG6-202ENST00000354901 PEX26Q7Z412 305 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 AIPL1Q9NZN9 384 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 PI4KBQ9UBF8 816 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 MYH4Q9Y623 1939 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 CALUO43852 315 aaPredicted RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 RPA1P27694 616 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 ALDH3A1P30838 453 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 COPB2P35606 906 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 TNNC1P63316 161 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 CCDC6Q16204 474 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 EDRF1Q3B7T1 1238 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 SYDE2Q5VT97 1194 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 ANO7Q6IWH7 933 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 STYK1Q6J9G0 422 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 GLYCTKQ8IVS8 523 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 TRIM42Q8IWZ5 723 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 SYT2Q8N9I0 419 aaPredicted RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 USP38Q8NB14 1042 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 UCMAQ8WVF2 138 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 MAIP1Q8WWC4 291 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 SYN2Q92777 582 aaPredicted RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 LENG9Q96B70 501 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 SLC12A6Q9UHW9 1150 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 ADAMTSL1Q8N6G6 1762 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 LRRN2O75325 713 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 CCND1P24385 295 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 GCLCP48506 637 aaPredicted RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 ZNF572Q7Z3I7 529 aaPredicted RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 GALNT15Q8N3T1 639 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 METTL13Q8N6R0 699 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 DYDC2Q96IM9 177 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 YIPF2Q9BWQ6 316 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 PREBQ9HCU5 417 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 OSGEPQ9NPF4 335 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 INTS9Q9NV88 658 aaKnown RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 DNAAF2Q9NVR5 837 aaKnown RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 NKX1-2Q9UD57 310 aaPredicted RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 CHORDC1Q9UHD1 332 aaPredicted RBP10.07□□□□□ -0.8
SMG6-202ENST00000354901 AMACRQ9UHK6 382 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 ASTN1O14525 1302 aa10.07□□□□□ -0.8
SMG6-202ENST00000354901 KRIT1O00522 736 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 MSH2P43246 934 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 ERVK-9P63128 1117 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 HHIPL2Q6UWX4 724 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 ZC3H18Q86VM9 953 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 SLC35C1Q96A29 364 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 NAP1L4Q99733 375 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 CELF4Q9BZC1 486 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 A0A1W2PRG0 241 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 CLRN2A0PK11 232 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 DAPK3O43293 454 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 ZNF189O75820 626 aaPredicted RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 FLOT1O75955 427 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 H2AFZP0C0S5 128 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 BMP3P12645 472 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 NCALDP61601 193 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 LACTB2Q53H82 288 aaPredicted RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 CRELD2Q6UXH1 353 aaPredicted RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 H2AFVQ71UI9 128 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 GDAP1Q8TB36 358 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 DCAF4Q8WV16 495 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 GBP5Q96PP8 586 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 DDX50Q9BQ39 737 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 GALNT8Q9NY28 637 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 ADAM22Q9P0K1 906 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 PITPNM2Q9BZ72 1349 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 COL11A2P13942 1736 aaPredicted RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 TCP10L2B9ZVM9 353 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 SART1O43290 800 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 COQ9O75208 318 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 MMP10P09238 476 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 FAM163BP0C2L3 166 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 RPL13P26373 211 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 RRP1BQ14684 758 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 SLMAPQ14BN4 828 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 LLGL1Q15334 1064 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 RINT1Q6NUQ1 792 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 PPP4R3CPQ6ZMV5 832 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 FRMD5Q7Z6J6 570 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 NCAPG2Q86XI2 1143 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 FAM186BQ8IYM0 893 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms