RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FGGP02679 453 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 AKR1B1P15121 316 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 KRT15P19012 456 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 SSTR3P32745 418 aaPredicted RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 SATB1Q01826 763 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF211Q13398 564 aaPredicted RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 GKAP1Q5VSY0 366 aaPredicted RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 KAZNQ674X7 775 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 FUT8Q9BYC5 575 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 UBE2TQ9NPD8 197 aaPredicted RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 SH3BP1Q9Y3L3 701 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 A0A1W2PQC6 194 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 H3BQF6 201 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 PRPSAP2O60256 369 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 CLTAP09496 248 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 ITGA4P13612 1032 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 ALDH1A3P47895 512 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 ADGRF4Q8IZF3 695 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 TBC1D19Q8N5T2 526 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 TNIP3Q96KP6 325 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 DAAM1Q9Y4D1 1078 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 H7C4K7 107 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF189O75820 626 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 GGPS1O95749 300 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 SRGNP10124 158 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 BMP6P22004 513 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 QARSP47897 775 aaKnown RBP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 MXI1P50539 228 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 ZKSCAN8Q15776 578 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 DNAJC24Q6P3W2 148 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 RFX6Q8HWS3 928 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 ATP6V1E2Q96A05 226 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 VPS37BQ9H9H4 285 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 CEP72Q9P209 647 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 MYMKA6NI61 221 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 ZW10O43264 779 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 MAP1SQ66K74 1059 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 XRRA1Q6P2D8 792 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 ASIC4Q96FT7 647 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 PCDHA10Q9Y5I2 948 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 KDM1AO60341 852 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 ORC2Q13416 577 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 PKN1Q16512 942 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 SWSAP1Q6NVH7 229 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 VSIG1Q86XK7 387 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 JPH1Q9HDC5 661 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 PLCB1Q9NQ66 1216 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 GABBR1Q9UBS5 961 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 NKRFO15226 690 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 SASH3O75995 380 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 AMHP03971 560 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 PMS1P54277 932 aaKnown RBP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 PRKCQQ04759 706 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 THOC5Q13769 683 aaKnown RBP11.61□□□□□ -0.55
CLCN6-202ENST00000346436 ITIH6Q6UXX5 1313 aa11.61□□□□□ -0.55
CLCN6-202ENST00000346436 CYP2C9P11712 490 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 STX2P32856 288 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
CLCN6-202ENST00000346436 EMBQ6PCB8 327 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 CTAGE3PQ8IX95 158 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 TRPC7Q9HCX4 862 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 SNX12Q9UMY4 172 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 FAM205AQ6ZU69 1335 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 PLSCR1O15162 318 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 GPR182O15218 404 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 GUCY1A3Q02108 690 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 MXD4Q14582 209 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-202ENST00000346436 KCNB1Q14721 858 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 PREPLQ4J6C6 727 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-202ENST00000346436 ALS2CLQ60I27 953 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 APPL2Q8NEU8 664 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 TBK1Q9UHD2 729 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 RICTORQ6R327 1708 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 A0A087WUV0 522 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-202ENST00000346436 RHOBTB3O94955 611 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 SLC4A1P02730 911 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 URODP06132 367 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 PEX3P56589 373 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 ASPHQ12797 758 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 GTF2H3Q13889 308 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 MAGED2Q9UNF1 606 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-202ENST00000346436 ITM2BQ9Y287 266 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-202ENST00000346436 PEAK1Q9H792 1746 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 PDXDC1Q6P996 788 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 MXD3Q9BW11 206 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 CA12O43570 354 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 FAM133BQ5BKY9 247 aaKnown RBP11.6□□□□□ -0.55
CLCN6-202ENST00000346436 RWDD4Q6NW29 188 aaKnown RBP11.6□□□□□ -0.55
CLCN6-202ENST00000346436 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 INTS13Q9NVM9 706 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 SNX24Q9Y343 169 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 DAGLAQ9Y4D2 1042 aa11.6□□□□□ -0.55
CLCN6-202ENST00000346436 CXCL11O14625 94 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 KIAA0391O15091 583 aaKnown RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF131P52739 623 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms