RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TBCKQ8TEA7 893 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 ZNF564Q8TBZ8 553 aaPredicted RBP20.47■□□□□ 0.87
HDAC4-201ENST00000345617 CCT7Q99832 543 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 KANSL2Q9H9L4 492 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 LZTS1Q9Y250 596 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 LSP1P33241 339 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 MTHFD1LQ6UB35 978 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 CARD14Q9BXL6 1004 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 TMEM154Q6P9G4 183 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 LRRC31Q6UY01 552 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 RFFLQ8WZ73 363 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 AGBL1Q96MI9 1066 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 STX3Q13277 289 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 LARGE2Q8N3Y3 721 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 LRRC47Q8N1G4 583 aaKnown RBP20.47■□□□□ 0.87
HDAC4-201ENST00000345617 BFARQ9NZS9 450 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 COBLO75128 1261 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 CLEC17AQ6ZS10 378 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 UBN2Q6ZU65 1347 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 AP3B2Q13367 1082 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 EFL1Q7Z2Z2 1120 aaKnown RBP20.46■□□□□ 0.87
HDAC4-201ENST00000345617 B4GALNT2Q8NHY0 566 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 ALAS1P13196 640 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 EEF2KMTQ96G04 330 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 SLC26A4O43511 780 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 ZNF18P17022 549 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 MCPH1Q8NEM0 835 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 FTOQ9C0B1 505 aaKnown RBP eCLIP20.46■□□□□ 0.875e-6■□□□□ 9.9
HDAC4-201ENST00000345617 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 PURAQ00577 322 aaKnown RBP20.46■□□□□ 0.87
HDAC4-201ENST00000345617 CMTR1Q8N1G2 835 aaKnown RBP20.46■□□□□ 0.87
HDAC4-201ENST00000345617 IMPDH2P12268 514 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
HDAC4-201ENST00000345617 RFWD2Q8NHY2 731 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 IFT43Q96FT9 208 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 ACAP3Q96P50 834 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 STAP1Q9ULZ2 295 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 INO80B-WBP1J3KQ70 363 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 INO80BQ9C086 356 aaPredicted RBP20.46■□□□□ 0.87
HDAC4-201ENST00000345617 TRABDQ9H4I3 376 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 FANCEQ9HB96 536 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 YEATS2Q9ULM3 1422 aa20.46■□□□□ 0.87
HDAC4-201ENST00000345617 FBLN1P23142 703 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 WASHC5Q12768 1159 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 CCDC142Q17RM4 750 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.45■□□□□ 0.86
HDAC4-201ENST00000345617 SH3TC2Q8TF17 1288 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 HACD3Q9P035 362 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 PNMA6FA0A0J9YX94 578 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 RESTQ13127 1097 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 NR3C1P04150 777 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 TNFAIP2Q03169 654 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 MXD4Q14582 209 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-201ENST00000345617 RBBP7Q16576 425 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 RAB42Q8N4Z0 105 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-201ENST00000345617 ITIH4Q14624 930 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 MAGEA13PA6NCF6 341 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 ARIH2O95376 493 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 CORO7P57737 925 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 KYAT1Q16773 422 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 CLEC4FQ8N1N0 589 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 IL17RAQ96F46 866 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 MYH1P12882 1939 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 MYH2Q9UKX2 1941 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 MYH4Q9Y623 1939 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 TK2O00142 265 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 NFRKBQ6P4R8 1299 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 NBNO60934 754 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 GRM1Q13255 1194 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 TLK2Q86UE8 772 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 CYFIP2Q96F07 1278 aa20.45■□□□□ 0.86
HDAC4-201ENST00000345617 AKAP10O43572 662 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 TYK2P29597 1187 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 SERPINB9P50453 376 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 SDR42E1Q8WUS8 393 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 SLC9A2Q9UBY0 812 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 CDYLQ9Y232 598 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 THRAP3Q9Y2W1 955 aaKnown RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 RWDD4Q6NW29 188 aaKnown RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 OSBPL8Q9BZF1 889 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 PARVAQ9NVD7 372 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 APPL1Q9UKG1 709 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 LRRC53A6NM62 1247 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ENO4A6NNW6 628 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 SPATA4Q8NEY3 305 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ARHGEF40Q8TER5 1519 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 SLC4A1P02730 911 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 GPR141Q7Z602 305 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 CCNYL1Q8N7R7 359 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 CEP170P1Q96L14 293 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ROPN1BQ9BZX4 212 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ROPN1Q9HAT0 212 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ZSCAN32Q9NX65 697 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 CNOT8Q9UFF9 292 aaKnown RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ARMCX4Q5H9R4 360 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 EXT2Q93063 718 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms