RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DNAJC19Q96DA6 116 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 TIGD1Q96MW7 591 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 MRPL4Q9BYD3 311 aaKnown RBP13.02□□□□□ -0.33
SNCA-202ENST00000345009 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.33
SNCA-202ENST00000345009 TMX1Q9H3N1 280 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
SNCA-202ENST00000345009 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 PCDHB7Q9Y5E2 793 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 A0A0U1RQF3 1178 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 K7ENM7 598 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 N4BP3O15049 544 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 HOXA2O43364 376 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 TSPAN1O60635 241 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 SMC2O95347 1197 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 EOMESO95936 686 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 CAMK2BQ13554 666 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 LRIT3Q3SXY7 679 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 FMR1NBQ8N0W7 255 aaPredicted RBP13.01□□□□□ -0.33
SNCA-202ENST00000345009 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 RSPH1Q8WYR4 309 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 TOP1MTQ969P6 601 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 KIFC3Q9BVG8 833 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 OSBPL7Q9BZF2 842 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 GOLPH3LQ9H4A5 285 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 ST6GALNAC4Q9H4F1 302 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 ELAC1Q9H777 363 aaKnown RBP13.01□□□□□ -0.33
SNCA-202ENST00000345009 OLFML3Q9NRN5 406 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 MSRAQ9UJ68 235 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 EXOC7Q9UPT5 735 aa13.01□□□□□ -0.33
SNCA-202ENST00000345009 CNTNAP2Q9UHC6 1331 aa13□□□□□ -0.33
SNCA-202ENST00000345009 A0A1B0GUA9 196 aa13□□□□□ -0.33
SNCA-202ENST00000345009 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13□□□□□ -0.33
SNCA-202ENST00000345009 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
SNCA-202ENST00000345009 UPP2O95045 317 aa13□□□□□ -0.33
SNCA-202ENST00000345009 HOXA11P31270 313 aaPredicted RBP13□□□□□ -0.33
SNCA-202ENST00000345009 FAM189BP81408 668 aa13□□□□□ -0.33
SNCA-202ENST00000345009 PSMD2Q13200 908 aa13□□□□□ -0.33
SNCA-202ENST00000345009 DSC3Q14574 896 aa13□□□□□ -0.33
SNCA-202ENST00000345009 RAB30Q15771 203 aa13□□□□□ -0.33
SNCA-202ENST00000345009 SLC27A1Q6PCB7 646 aa13□□□□□ -0.33
SNCA-202ENST00000345009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13□□□□□ -0.33
SNCA-202ENST00000345009 UNC13DQ70J99 1090 aa13□□□□□ -0.33
SNCA-202ENST00000345009 ZNF720Q7Z2F6 126 aa13□□□□□ -0.33
SNCA-202ENST00000345009 RTN4RL1Q86UN2 441 aaPredicted RBP13□□□□□ -0.33
SNCA-202ENST00000345009 SFR1Q86XK3 245 aa13□□□□□ -0.33
SNCA-202ENST00000345009 NPAS4Q8IUM7 802 aa13□□□□□ -0.33
SNCA-202ENST00000345009 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
SNCA-202ENST00000345009 ELOA2Q8IYF1 753 aaPredicted RBP13□□□□□ -0.33
SNCA-202ENST00000345009 KCNN1Q92952 543 aa13□□□□□ -0.33
SNCA-202ENST00000345009 HVCN1Q96D96 273 aa13□□□□□ -0.33
SNCA-202ENST00000345009 BICD1Q96G01 975 aa13□□□□□ -0.33
SNCA-202ENST00000345009 RAD9AQ99638 391 aa13□□□□□ -0.33
SNCA-202ENST00000345009 TCHPQ9BT92 498 aa13□□□□□ -0.33
SNCA-202ENST00000345009 GTPBP4Q9BZE4 634 aaKnown RBP13□□□□□ -0.33
SNCA-202ENST00000345009 CCDC113Q9H0I3 377 aa13□□□□□ -0.33
SNCA-202ENST00000345009 UBN1Q9NPG3 1134 aa13□□□□□ -0.33
SNCA-202ENST00000345009 EXOC1Q9NV70 894 aa13□□□□□ -0.33
SNCA-202ENST00000345009 TMEM161AQ9NX61 479 aa13□□□□□ -0.33
SNCA-202ENST00000345009 INSL6Q9Y581 213 aa13□□□□□ -0.33
SNCA-202ENST00000345009 C9IYK1 514 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 TLL1O43897 1013 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 ZNF623O75123 536 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 GADD45BO75293 160 aaPredicted RBP12.99□□□□□ -0.33
SNCA-202ENST00000345009 KIF20AO95235 890 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 GJB5O95377 273 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 GCNT3O95395 438 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 ARF4P18085 180 aaPredicted RBP12.99□□□□□ -0.33
SNCA-202ENST00000345009 SMAD3P84022 425 aaKnown RBP12.99□□□□□ -0.33
SNCA-202ENST00000345009 GTF2BQ00403 316 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 SNW1Q13573 536 aaKnown RBP12.99□□□□□ -0.33
SNCA-202ENST00000345009 POSTNQ15063 836 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 AMHR2Q16671 573 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 DCAF4L1Q3SXM0 396 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 ATF7IP2Q5U623 682 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 ZPBP2Q6X784 338 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 ABI1Q8IZP0 508 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 ENGASEQ8NFI3 743 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 YME1L1Q96TA2 773 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 BLZF1Q9H2G9 400 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 TMEM206Q9H813 350 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 FAM105AQ9NUU6 356 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 RMND1Q9NWS8 449 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 TBX20Q9UMR3 447 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 TNFSF13BQ9Y275 285 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 PCDHB2Q9Y5E7 798 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 PCDHA11Q9Y5I1 949 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 MYH11P35749 1972 aa12.99□□□□□ -0.33
SNCA-202ENST00000345009 ADGRA3Q8IWK6 1321 aa12.98□□□□□ -0.33
SNCA-202ENST00000345009 HNRNPDLO14979 420 aaKnown RBP12.98□□□□□ -0.33
SNCA-202ENST00000345009 MGEA5O60502 916 aa12.98□□□□□ -0.33
SNCA-202ENST00000345009 NR1I2O75469 434 aa12.98□□□□□ -0.33
SNCA-202ENST00000345009 TOM1L1O75674 476 aa12.98□□□□□ -0.33
SNCA-202ENST00000345009 RPN1P04843 607 aaKnown RBP12.98□□□□□ -0.33
SNCA-202ENST00000345009 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
SNCA-202ENST00000345009 NMT1P30419 496 aaKnown RBP12.98□□□□□ -0.33
SNCA-202ENST00000345009 MATR3P43243 847 aaKnown RBP eCLIP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms