RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 SLC20A1Q8WUM9 679 aa17.52■□□□□ 0.4
RDX-201ENST00000343115 TRIM6Q9C030 488 aaPredicted RBP17.52■□□□□ 0.4
RDX-201ENST00000343115 DNAI2Q9GZS0 605 aa17.52■□□□□ 0.4
RDX-201ENST00000343115 COX16Q9P0S2 106 aa17.52■□□□□ 0.4
RDX-201ENST00000343115 MAD1L1Q9Y6D9 718 aa17.52■□□□□ 0.4
RDX-201ENST00000343115 BRAFP15056 766 aa17.52■□□□□ 0.39
RDX-201ENST00000343115 SREBF1P36956 1147 aa17.52■□□□□ 0.39
RDX-201ENST00000343115 IL9RQ01113 521 aa17.52■□□□□ 0.39
RDX-201ENST00000343115 MICAL1Q8TDZ2 1067 aa17.52■□□□□ 0.39
RDX-201ENST00000343115 POP1Q99575 1024 aaKnown RBP17.52■□□□□ 0.39
RDX-201ENST00000343115 KCNG1Q9UIX4 513 aa17.52■□□□□ 0.39
RDX-201ENST00000343115 POLR2BP30876 1174 aaKnown RBP17.51■□□□□ 0.39
RDX-201ENST00000343115 KRT81Q14533 505 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 SLC29A2Q14542 456 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 TRADDQ15628 312 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 MIS18BP1Q6P0N0 1132 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 RFX6Q8HWS3 928 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 WRNIP1Q96S55 665 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 KRT17Q04695 432 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 ZNF449Q6P9G9 518 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 BAP1Q92560 729 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 P3H4Q92791 437 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 STMN2Q93045 179 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 SLC35C1Q96A29 364 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 TISP43B9A030 160 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 TMEM253P0C7T8 217 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 PPP2R5AQ15172 486 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 CBWD2Q8IUF1 395 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 TMEM143Q96AN5 459 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 ERP44Q9BS26 406 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 ZNF70Q9UC06 446 aaPredicted RBP17.51■□□□□ 0.39
RDX-201ENST00000343115 ODF2LQ9ULJ1 636 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 TTLL3Q9Y4R7 772 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 KRT76Q01546 638 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 ZNF354CQ86Y25 554 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 HVCN1Q96D96 273 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 CHMP6Q96FZ7 201 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 RILPQ96NA2 401 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 CSADQ9Y600 493 aa17.51■□□□□ 0.39
RDX-201ENST00000343115 RASA4BC9J798 803 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 TLR3O15455 904 aaKnown RBP17.5■□□□□ 0.39
RDX-201ENST00000343115 RASA4O43374 803 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 RTN2O75298 545 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 MTMR2Q13614 643 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 TRIM11Q96F44 468 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 POLR3CQ9BUI4 534 aaPredicted RBP17.5■□□□□ 0.39
RDX-201ENST00000343115 PCSK1NQ9UHG2 260 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 DIS3Q9Y2L1 958 aaKnown RBP17.5■□□□□ 0.39
RDX-201ENST00000343115 SYF2O95926 243 aaKnown RBP17.5■□□□□ 0.39
RDX-201ENST00000343115 JAK3P52333 1124 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 ERVK-9P63128 1117 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 CDO1Q16878 200 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 BBOF1Q8ND07 529 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 SLC17A8Q8NDX2 589 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 FBXO25Q8TCJ0 367 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 C18orf8Q96DM3 657 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 ZDHHC15Q96MV8 337 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 SUCLA2Q9P2R7 463 aaPredicted RBP17.5■□□□□ 0.39
RDX-201ENST00000343115 PCDHA10Q9Y5I2 948 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 LMO7Q8WWI1 1683 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 FAM187AA6NFU0 413 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 GUCY2CP25092 1073 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 FAM163AQ96GL9 167 aaPredicted RBP17.5■□□□□ 0.39
RDX-201ENST00000343115 APOL6Q9BWW8 343 aa17.5■□□□□ 0.39
RDX-201ENST00000343115 ENTPD3O75355 529 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 SGPL1O95470 568 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 TROVE2P10155 538 aaKnown RBP eCLIP17.49■□□□□ 0.39
RDX-201ENST00000343115 CHN1P15882 459 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 MAN1A1P33908 653 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 HMGCS2P54868 508 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 CORO7P57737 925 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 ITIH3Q06033 890 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 ARHGEF18Q6ZSZ5 1173 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.49■□□□□ 0.39
RDX-201ENST00000343115 MCPH1Q8NEM0 835 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 MXRA8Q9BRK3 442 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 POLR3FQ9H1D9 316 aaPredicted RBP17.49■□□□□ 0.39
RDX-201ENST00000343115 USP20Q9Y2K6 914 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 DDX3XO00571 662 aaKnown RBP eCLIP17.49■□□□□ 0.397e-9■■■□□ 18.1
RDX-201ENST00000343115 CCDC110Q8TBZ0 833 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 RPAP3Q9H6T3 665 aaPredicted RBP17.49■□□□□ 0.39
RDX-201ENST00000343115 ACP6Q9NPH0 428 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 AIPL1Q9NZN9 384 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 SOX10P56693 466 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 KYNUQ16719 465 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 SYCP2LQ5T4T6 812 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 SESTD1Q86VW0 696 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 ERICH1Q86X53 443 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 TAAR1Q96RJ0 339 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 WNT8AQ9H1J5 351 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 ATP6V0A4Q9HBG4 840 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 SALL4Q9UJQ4 1053 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 F8VZ95 297 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 TM4SF1P30408 202 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 GNA15P30679 374 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 RPS6P62753 249 aaKnown RBP17.49■□□□□ 0.39
RDX-201ENST00000343115 SLC35G1Q2M3R5 365 aa17.49■□□□□ 0.39
RDX-201ENST00000343115 ZNF720Q7Z2F6 126 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms