RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 LIG4P49917 911 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 GPC5P78333 572 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 ORC1Q13415 861 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 CUL1Q13616 776 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 DCUN1D2Q6PH85 259 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 TMEM270Q6UE05 265 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 HOOK3Q86VS8 718 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 NT5C1BQ96P26 610 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 EDEM3Q9BZQ6 932 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 GDF3Q9NR23 364 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 COG5Q9UP83 839 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 F5H423 210 aaPredicted RBP13.47□□□□□ -0.25
LMX1A-202ENST00000342310 OPLAHO14841 1288 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 NEBLO76041 1014 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 MAP3K6O95382 1288 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 DMP1Q13316 513 aaPredicted RBP13.47□□□□□ -0.25
LMX1A-202ENST00000342310 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 TMEM117Q9H0C3 514 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 CHD4Q14839 1912 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 MYBL1P10243 752 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 TMED2Q15363 201 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 WDR44Q5JSH3 913 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 ACCSQ96QU6 501 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 FAM114A2Q9NRY5 505 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
LMX1A-202ENST00000342310 PCDHA2Q9Y5H9 948 aa13.47□□□□□ -0.25
LMX1A-202ENST00000342310 PITPNM2Q9BZ72 1349 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 ATP9AO75110 1047 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 CYP3A4P08684 503 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 SMARCA1P28370 1054 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 STX2P32856 288 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 CRY2Q49AN0 593 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.25
LMX1A-202ENST00000342310 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 TRAF3IP3Q9Y228 551 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 PCDHB4Q9Y5E5 795 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 CENPFP49454 3210 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 CSDE1O75534 798 aaKnown RBP13.46□□□□□ -0.25
LMX1A-202ENST00000342310 CREB1P16220 341 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 ITGB5P18084 799 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.25
LMX1A-202ENST00000342310 RPS6P62753 249 aaKnown RBP13.46□□□□□ -0.25
LMX1A-202ENST00000342310 SNRNP35Q16560 246 aaKnown RBP13.46□□□□□ -0.25
LMX1A-202ENST00000342310 EAPPQ56P03 285 aaPredicted RBP13.46□□□□□ -0.25
LMX1A-202ENST00000342310 RNF207Q6ZRF8 634 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 LENG9Q96B70 501 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 SEC16BQ96JE7 1060 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 ZDHHC15Q96MV8 337 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 KLF6Q99612 283 aaPredicted RBP13.46□□□□□ -0.25
LMX1A-202ENST00000342310 ERP44Q9BS26 406 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 CACNA1SQ13698 1873 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 ITGB4P16144 1822 aa13.46□□□□□ -0.25
LMX1A-202ENST00000342310 BCL9LQ86UU0 1499 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.26
LMX1A-202ENST00000342310 CCDC188H7C350 402 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 GOLGA8RI6L899 631 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 ECEL1O95672 775 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 SRGAP2CP0DJJ0 459 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 KRT10P13645 584 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 NSFP46459 744 aaKnown RBP13.46□□□□□ -0.26
LMX1A-202ENST00000342310 QARSP47897 775 aaKnown RBP13.46□□□□□ -0.26
LMX1A-202ENST00000342310 STRIP1Q5VSL9 837 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 PAGR1Q9BTK6 254 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 C1orf112Q9NSG2 853 aa13.46□□□□□ -0.26
LMX1A-202ENST00000342310 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 GRIN2DO15399 1336 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 RPL21P46778 160 aaKnown RBP13.45□□□□□ -0.26
LMX1A-202ENST00000342310 MTMR2Q13614 643 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 DACT2Q5SW24 774 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 C1orf186Q6ZWK4 172 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 TMBIM4Q9HC24 238 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 FGFR1OP2Q9NVK5 253 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 ODF2LQ9ULJ1 636 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 ADAMTS7Q9UKP4 1686 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 ANKRD63C9JTQ0 380 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 IGBP1P78318 339 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 KRT17Q04695 432 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
LMX1A-202ENST00000342310 BAATQ14032 418 aaPredicted RBP13.45□□□□□ -0.26
LMX1A-202ENST00000342310 TMC3Q7Z5M5 1100 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 CCDC13Q8IYE1 715 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 JDP2Q8WYK2 163 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 ARHGEF2Q92974 986 aaKnown RBP13.45□□□□□ -0.26
LMX1A-202ENST00000342310 CAVIN3Q969G5 261 aa13.45□□□□□ -0.26
LMX1A-202ENST00000342310 CNGA1P29973 690 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 SPIRE1Q08AE8 756 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 RASA3Q14644 834 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 ZNF449Q6P9G9 518 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 NOP9Q86U38 636 aaKnown RBP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 LRRC34Q8IZ02 419 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 SERPINA10Q9UK55 444 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 VAV3Q9UKW4 847 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 TCP11X1B4DZS4 312 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 EZRP15311 586 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms