RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 ATF7P17544 494 aaPredicted RBP18.37■□□□□ 0.53
SFN-201ENST00000339276 PBX2P40425 430 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 KMT5BQ4FZB7 885 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 FAM26FQ5R3K3 315 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 ATF7IP2Q5U623 682 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 SLC27A1Q6PCB7 646 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 MAP4K3Q8IVH8 894 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 RNF169Q8NCN4 708 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 CCDC34Q96HJ3 373 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 ACO2Q99798 780 aaKnown RBP18.37■□□□□ 0.53
SFN-201ENST00000339276 ZBED2Q9BTP6 218 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 STRA6Q9BX79 667 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 EXOC1Q9NV70 894 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 TMEM161AQ9NX61 479 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 LRFN2Q9ULH4 789 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 PCDHB2Q9Y5E7 798 aa18.37■□□□□ 0.53
SFN-201ENST00000339276 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 SOX1O00570 391 aaPredicted RBP18.36■□□□□ 0.53
SFN-201ENST00000339276 STAG3L1P0CL83 205 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 MYOGP15173 224 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 SCP2P22307 547 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 GATMP50440 423 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 RAB27AP51159 221 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 KCNA1Q09470 495 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 HABP4Q5JVS0 413 aaKnown RBP18.36■□□□□ 0.53
SFN-201ENST00000339276 ZNF598Q86UK7 904 aaKnown RBP18.36■□□□□ 0.53
SFN-201ENST00000339276 ERCC4Q92889 916 aaPredicted RBP18.36■□□□□ 0.53
SFN-201ENST00000339276 LPPQ93052 612 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 BICD1Q96G01 975 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 PBX4Q9BYU1 374 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 IKZF4Q9H2S9 585 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 ELAC1Q9H777 363 aaKnown RBP18.36■□□□□ 0.53
SFN-201ENST00000339276 TNFSF13BQ9Y275 285 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 PCDHB7Q9Y5E2 793 aa18.36■□□□□ 0.53
SFN-201ENST00000339276 MEIS3P2A8K0S8 358 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 TLL1O43897 1013 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 FGFR1P11362 822 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 ABCD1P33897 745 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 SMAD3P84022 425 aaKnown RBP18.35■□□□□ 0.53
SFN-201ENST00000339276 L1TD1Q5T7N2 865 aaKnown RBP18.35■□□□□ 0.53
SFN-201ENST00000339276 SMG8Q8ND04 991 aaKnown RBP18.35■□□□□ 0.53
SFN-201ENST00000339276 HVCN1Q96D96 273 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 ZBTB45Q96K62 511 aaPredicted RBP18.35■□□□□ 0.53
SFN-201ENST00000339276 TRIM6Q9C030 488 aaPredicted RBP18.35■□□□□ 0.53
SFN-201ENST00000339276 NXF3Q9H4D5 531 aaKnown RBP18.35■□□□□ 0.53
SFN-201ENST00000339276 PTPRHQ9HD43 1115 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 SLC39A2Q9NP94 309 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 RNF19AQ9NV58 838 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 YBX2Q9Y2T7 364 aaKnown RBP18.35■□□□□ 0.53
SFN-201ENST00000339276 HES2Q9Y543 173 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 IPPQ9Y573 584 aa18.35■□□□□ 0.53
SFN-201ENST00000339276 LCHNA4D1U4 455 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 ABLIM1O14639 778 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 HNRNPDLO14979 420 aaKnown RBP18.34■□□□□ 0.53
SFN-201ENST00000339276 ZNF623O75123 536 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 DGKIO75912 1065 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 PRPF6O94906 941 aaKnown RBP18.34■□□□□ 0.53
SFN-201ENST00000339276 SKIP12755 728 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 PROZP22891 400 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 LIG4P49917 911 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 HTRA4P83105 476 aaPredicted RBP18.34■□□□□ 0.53
SFN-201ENST00000339276 ALCAMQ13740 583 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 ZNF568Q3ZCX4 644 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 ZPBP2Q6X784 338 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 YME1L1Q96TA2 773 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 ADPGKQ9BRR6 497 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 APOL6Q9BWW8 343 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 CDT1Q9H211 546 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 RC3H2Q9HBD1 1191 aaKnown RBP18.34■□□□□ 0.53
SFN-201ENST00000339276 ANKFY1Q9P2R3 1169 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 PCDHB13Q9Y5F0 798 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 PCDHA11Q9Y5I1 949 aa18.34■□□□□ 0.53
SFN-201ENST00000339276 FNDC1Q4ZHG4 1894 aaPredicted RBP18.33■□□□□ 0.53
SFN-201ENST00000339276 TISP43B9A030 160 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 TOM1L1O75674 476 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 EOMESO95936 686 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 PIGRP01833 764 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 HARSP12081 509 aaKnown RBP18.33■□□□□ 0.53
SFN-201ENST00000339276 STK4Q13043 487 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 SLC39A4Q6P5W5 647 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 MPZL3Q6UWV2 235 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 EPM2AIP1Q7L775 607 aaPredicted RBP18.33■□□□□ 0.53
SFN-201ENST00000339276 MRPL10Q7Z7H8 261 aaKnown RBP18.33■□□□□ 0.53
SFN-201ENST00000339276 ELOA2Q8IYF1 753 aaPredicted RBP18.33■□□□□ 0.53
SFN-201ENST00000339276 KIAA0895Q8NCT3 520 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 ZNF689Q96CS4 500 aaPredicted RBP18.33■□□□□ 0.53
SFN-201ENST00000339276 ACCSQ96QU6 501 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 RAD9AQ99638 391 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 HAPLN2Q9GZV7 340 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 RNF39Q9H2S5 420 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.53
SFN-201ENST00000339276 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.53
SFN-201ENST00000339276 INSL6Q9Y581 213 aa18.33■□□□□ 0.53
SFN-201ENST00000339276 ANKRD63C9JTQ0 380 aa18.32■□□□□ 0.52
SFN-201ENST00000339276 EIF3DO15371 548 aaKnown RBP eCLIP18.32■□□□□ 0.52
SFN-201ENST00000339276 RHOBTB3O94955 611 aa18.32■□□□□ 0.52
SFN-201ENST00000339276 ARHGEF15O94989 841 aa18.32■□□□□ 0.52
SFN-201ENST00000339276 DNAJB2P25686 324 aa18.32■□□□□ 0.52
SFN-201ENST00000339276 RAB30Q15771 203 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms