RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NSMFQ6X4W1 530 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 MIER3Q7Z3K6 550 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 PARVGQ9HBI0 331 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 TYW1Q9NV66 732 aaKnown RBP20.26■□□□□ 0.83
PSPC1-201ENST00000338910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.26■□□□□ 0.83
PSPC1-201ENST00000338910 PPP2R3BQ9Y5P8 575 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 DHX15O43143 795 aaKnown RBP20.26■□□□□ 0.83
PSPC1-201ENST00000338910 AKAP3O75969 853 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 NR3C1P04150 777 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 CASP4P49662 377 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 SUPT20HL1Q3ZLR7 823 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 METTL13Q8N6R0 699 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 SYT17Q9BSW7 474 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 FAM129AQ9BZQ8 928 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 RIPK3Q9Y572 518 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 ASTN1O14525 1302 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 BCRP11274 1271 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 SATB1Q01826 763 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 MTMR1Q13613 665 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 BMT2Q1RMZ1 405 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 PCNX4Q63HM2 1172 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 HIBCHQ6NVY1 386 aaPredicted RBP20.25■□□□□ 0.83
PSPC1-201ENST00000338910 MAEAQ7L5Y9 396 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 TRMT1LQ7Z2T5 733 aaKnown RBP20.25■□□□□ 0.83
PSPC1-201ENST00000338910 CCDC197Q8NCU1 140 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 MDM1Q8TC05 714 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 ZNF317Q96PQ6 595 aaPredicted RBP20.25■□□□□ 0.83
PSPC1-201ENST00000338910 AMACRQ9UHK6 382 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 UBIAD1Q9Y5Z9 338 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 ECM2O94769 699 aaPredicted RBP20.25■□□□□ 0.83
PSPC1-201ENST00000338910 DHX9Q08211 1270 aaKnown RBP20.25■□□□□ 0.83
PSPC1-201ENST00000338910 ENOX2Q16206 610 aaKnown RBP20.25■□□□□ 0.83
PSPC1-201ENST00000338910 ASIC2Q16515 512 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 ACCSLQ4AC99 568 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 C10orf76Q5T2E6 689 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 FRMD5Q7Z6J6 570 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 SLITRK6Q9H5Y7 841 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 AGO4Q9HCK5 861 aaKnown RBP20.25■□□□□ 0.83
PSPC1-201ENST00000338910 SLC12A4Q9UP95 1085 aa20.25■□□□□ 0.83
PSPC1-201ENST00000338910 ARHGEF35A5YM69 484 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 KRIT1O00522 736 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 TGFB1I1O43294 461 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 SLC8A3P57103 927 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 DCAF17Q5H9S7 520 aaPredicted RBP20.24■□□□□ 0.83
PSPC1-201ENST00000338910 RNF207Q6ZRF8 634 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 RMDN3Q96TC7 470 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 GANQ9H2C0 597 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 PCDHB13Q9Y5F0 798 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 USP2O75604 605 aaPredicted RBP20.24■□□□□ 0.83
PSPC1-201ENST00000338910 GSTA1P08263 222 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 ITGA4P13612 1032 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 YBX3P16989 372 aaKnown RBP eCLIP20.24■□□□□ 0.832e-7■■■■□ 22.9
PSPC1-201ENST00000338910 MUTP22033 750 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 RPL13P26373 211 aaKnown RBP20.24■□□□□ 0.83
PSPC1-201ENST00000338910 GHRHRQ02643 423 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 PGM5Q15124 567 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 PPP1R7Q15435 360 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 KCTD19Q17RG1 926 aaPredicted RBP20.24■□□□□ 0.83
PSPC1-201ENST00000338910 ODR4Q5SWX8 454 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 TCERG1LQ5VWI1 586 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 CRELD2Q6UXH1 353 aaPredicted RBP20.24■□□□□ 0.83
PSPC1-201ENST00000338910 FAM178BQ8IXR5 827 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 RASGEF1CQ8N431 466 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 MAB21L3Q8N8X9 362 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.24■□□□□ 0.83
PSPC1-201ENST00000338910 EBF2Q9HAK2 575 aa20.24■□□□□ 0.83
PSPC1-201ENST00000338910 FRMPD4Q14CM0 1322 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 C19orf81C9J6K1 198 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 PPP1R12BO60237 982 aaPredicted RBP20.23■□□□□ 0.83
PSPC1-201ENST00000338910 ACTN1P12814 892 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 GBP2P32456 591 aaPredicted RBP20.23■□□□□ 0.83
PSPC1-201ENST00000338910 PTK2Q05397 1052 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 IFI16Q16666 785 aaKnown RBP20.23■□□□□ 0.83
PSPC1-201ENST00000338910 ZNF720Q7Z2F6 126 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 FMNL3Q8IVF7 1028 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 SH2D3AQ9BRG2 576 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 TXLNGYQ9BZA5 131 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 TRIM6Q9C030 488 aaPredicted RBP20.23■□□□□ 0.83
PSPC1-201ENST00000338910 ADARB2Q9NS39 739 aaKnown RBP20.23■□□□□ 0.83
PSPC1-201ENST00000338910 BAIAP2L1Q9UHR4 511 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 TTI1O43156 1089 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 RPSAP08865 295 aaKnown RBP20.23■□□□□ 0.83
PSPC1-201ENST00000338910 XRCC5P13010 732 aaKnown RBP20.23■□□□□ 0.83
PSPC1-201ENST00000338910 EIF3BP55884 814 aaKnown RBP20.23■□□□□ 0.83
PSPC1-201ENST00000338910 C12orf42Q96LP6 360 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 FIZ1Q96SL8 496 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 AFG3L2Q9Y4W6 797 aa20.23■□□□□ 0.83
PSPC1-201ENST00000338910 PHIPQ8WWQ0 1821 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PPP1R12AO14974 1030 aaPredicted RBP20.22■□□□□ 0.83
PSPC1-201ENST00000338910 ATP9AO75110 1047 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PPFIA2O75334 1257 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 NEBLO76041 1014 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 P4HBP07237 508 aaKnown RBP20.22■□□□□ 0.83
PSPC1-201ENST00000338910 SLC9A1P19634 815 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 RIPK1Q13546 671 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 BAATQ14032 418 aaPredicted RBP20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PLS1Q14651 629 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 COG2Q14746 738 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PTPROQ16827 1216 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 SPDYCQ5MJ68 293 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms