RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 JPH1Q9HDC5 661 aaPredicted RBP9.57□□□□□ -0.88
SNCA-201ENST00000336904 TBC1D22BQ9NU19 505 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 CYP39A1Q9NYL5 469 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 PCDHA10Q9Y5I2 948 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 PTPRJQ12913 1337 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 SMIM23A6NLE4 172 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 SPDYE16A6NNV3 312 aaPredicted RBP9.56□□□□□ -0.88
SNCA-201ENST00000336904 PLA2G6O60733 806 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 KCNA2P16389 499 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 CDR1P51861 262 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 TTMPQ5BVD1 217 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 MAATS1Q7Z4T9 603 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 NCAPG2Q86XI2 1143 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 FAM71BQ8TC56 605 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 AFAP1L1Q8TED9 768 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 BCCIPQ9P287 314 aaKnown RBP eCLIP9.56□□□□□ -0.88
SNCA-201ENST00000336904 PTPN22Q9Y2R2 807 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 STK24Q9Y6E0 443 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 GOLGA6CA6NDK9 693 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 GOLGA6DP0CG33 693 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 BCRP11274 1271 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 PRLRP16471 622 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
SNCA-201ENST00000336904 OSTNP61366 133 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 INTS8Q75QN2 995 aaKnown RBP9.56□□□□□ -0.88
SNCA-201ENST00000336904 TAS1R3Q7RTX0 852 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 ZBTB33Q86T24 672 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 TRAPPC12Q8WVT3 735 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 OTUD5Q96G74 571 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 RUFY1Q96T51 708 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 GOLGA6AQ9NYA3 693 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 SYNPO2Q9UMS6 1093 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 NLRP11P59045 1033 aaKnown RBP9.56□□□□□ -0.88
SNCA-201ENST00000336904 BIRC3Q13489 604 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 VGLL4Q14135 290 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 GOLGA6L1Q8N7Z2 621 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 CPA5Q8WXQ8 436 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 ELP3Q9H9T3 547 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 BTBD7Q9P203 1132 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 SLC9A2Q9UBY0 812 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 AMFRQ9UKV5 643 aa9.56□□□□□ -0.88
SNCA-201ENST00000336904 BZW2Q9Y6E2 419 aaKnown RBP9.56□□□□□ -0.88
SNCA-201ENST00000336904 UMODL1Q5DID0 1318 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 PGRMC1O00264 195 aaKnown RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 CHRNB2P17787 502 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 TNNI1P19237 187 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 ATP4AP20648 1035 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 DSG3P32926 999 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 KCNJ1P48048 391 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 POLGP54098 1239 aaPredicted RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 EPHB4P54760 987 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 TGFB2P61812 414 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 GTF2BQ00403 316 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 DHX9Q08211 1270 aaKnown RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 LY6KQ17RY6 165 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 ZNF394Q53GI3 561 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 GJC2Q5T442 439 aaPredicted RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 SV2AQ7L0J3 742 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 IFT20Q8IY31 132 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 C4orf19Q8IY42 314 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 LRRC71Q8N4P6 559 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 REPS2Q8NFH8 660 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 NSUN6Q8TEA1 469 aaKnown RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 C18orf8Q96DM3 657 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 KLRG1Q96E93 195 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 RNPC3Q96LT9 517 aaKnown RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 MKNK1Q9BUB5 465 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 HAPLN2Q9GZV7 340 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 FAM107BQ9H098 131 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 TMEM206Q9H813 350 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 RSPH14Q9UHP6 348 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 O00370 1275 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 SLC26A4O43511 780 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 ZEB2O60315 1214 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 SMTNP53814 917 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 KRT76Q01546 638 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 PDCLQ13371 301 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 TTLL12Q14166 644 aaPredicted RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 ASAP3Q8TDY4 903 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 PARD3BQ8TEW8 1205 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 UBLCP1Q8WVY7 318 aaPredicted RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 RFFLQ8WZ73 363 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 TARS2Q9BW92 718 aaKnown RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 ACBD3Q9H3P7 528 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 DNAJC17Q9NVM6 304 aaKnown RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 KLHL11Q9NVR0 708 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 DBR1Q9UK59 544 aaKnown RBP9.55□□□□□ -0.88
SNCA-201ENST00000336904 NENFQ9UMX5 172 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 ALG6Q9Y672 507 aa9.55□□□□□ -0.88
SNCA-201ENST00000336904 GTPBP10A4D1E9 387 aaKnown RBP9.54□□□□□ -0.88
SNCA-201ENST00000336904 ZNF233A6NK53 670 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 LMNB1P20700 586 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 COMTP21964 271 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 SNX1Q13596 522 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 PPP2R5AQ15172 486 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 DCAF15Q66K64 600 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 CHADLQ6NUI6 762 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 TXLNBQ8N3L3 684 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms