RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 ZNF862O60290 1169 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 DKC1O60832 514 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRIM16-201ENST00000336708 RDXP35241 583 aaKnown RBP10.57□□□□□ -0.72
TRIM16-201ENST00000336708 PEX3P56589 373 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 GSCP56915 257 aaPredicted RBP10.57□□□□□ -0.72
TRIM16-201ENST00000336708 BIRC2Q13490 618 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 XKR9Q5GH70 373 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 PLA2G4FQ68DD2 849 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 FAM43BQ6ZT52 329 aaPredicted RBP10.57□□□□□ -0.72
TRIM16-201ENST00000336708 EIF1ADQ8N9N8 165 aaKnown RBP10.57□□□□□ -0.72
TRIM16-201ENST00000336708 ZSWIM2Q8NEG5 633 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 RFFLQ8WZ73 363 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 KIFAP3Q92845 792 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 PCIF1Q9H4Z3 704 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 TTC7AQ9ULT0 858 aaPredicted RBP10.57□□□□□ -0.72
TRIM16-201ENST00000336708 AFG3L2Q9Y4W6 797 aa10.57□□□□□ -0.72
TRIM16-201ENST00000336708 SPATA31C2B4DYI2 1134 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 FOXN3O00409 490 aaPredicted RBP10.56□□□□□ -0.72
TRIM16-201ENST00000336708 ADRB2P07550 413 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 NPTX2P47972 431 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 PLS1Q14651 629 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 ANGEL2Q5VTE6 544 aaKnown RBP10.56□□□□□ -0.72
TRIM16-201ENST00000336708 OTUD6AQ7L8S5 288 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 GLYCTKQ8IVS8 523 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 ARHGEF19Q8IW93 802 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 GSPT2Q8IYD1 628 aaKnown RBP10.56□□□□□ -0.72
TRIM16-201ENST00000336708 CDHR1Q96JP9 859 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 MFSD14AQ96MC6 490 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 AGPAT1Q99943 283 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 TMEM117Q9H0C3 514 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 GJA3Q9Y6H8 435 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 IGSF9BQ9UPX0 1349 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 ANKRD63C9JTQ0 380 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 HMGCS2P54868 508 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 SLC7A5Q01650 507 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 CETN1Q12798 172 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 ABHD15Q6UXT9 468 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 DNAAF5Q86Y56 855 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 RDH13Q8NBN7 331 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 RNF217Q8TC41 542 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 BSNDQ8WZ55 320 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 TAF4BQ92750 862 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 ISCUQ9H1K1 167 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 TCEAL9Q9UHQ7 104 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 BCS1LQ9Y276 419 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 SBF1O95248 1867 aa10.56□□□□□ -0.72
TRIM16-201ENST00000336708 ANKRD62A6NC57 917 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 PSAPP07602 524 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 GLI1P08151 1106 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 GTF2H1P32780 548 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 ICAM3P32942 547 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 SMTNP53814 917 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 ACTN3Q08043 901 aaPredicted RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 SWT1Q5T5J6 900 aaKnown RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 FAM102BQ5T8I3 360 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 SLC39A4Q6P5W5 647 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 KCNV1Q6PIU1 500 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 CEP57Q86XR8 500 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 IFT20Q8IY31 132 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 METTL13Q8N6R0 699 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 SLC35G2Q8TBE7 412 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 TRPM4Q8TD43 1214 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 ATP6V0A1Q93050 837 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 SH3GL2Q99962 352 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 TEX13BQ9BXU2 312 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 ACAD9Q9H845 621 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 DIS3Q9Y2L1 958 aaKnown RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 MYH9P35579 1960 aaKnown RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 SPDYE16A6NNV3 312 aaPredicted RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 KCNK3O14649 394 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 ATG7O95352 703 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 PAX7P23759 505 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 MATR3P43243 847 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 DMP1Q13316 513 aaPredicted RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 FAM71AQ8IYT1 594 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 MREGQ8N565 214 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 BCAS4Q8TDM0 211 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 N4BP2L2Q92802 583 aaPredicted RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 CCDC43Q96MW1 224 aaKnown RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 UBE2TQ9NPD8 197 aaPredicted RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 A1CFQ9NQ94 594 aaKnown RBP10.55□□□□□ -0.72
TRIM16-201ENST00000336708 GPRC5DQ9NZD1 345 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 GABBR1Q9UBS5 961 aa10.55□□□□□ -0.72
TRIM16-201ENST00000336708 DDX3YO15523 660 aaKnown RBP10.54□□□□□ -0.72
TRIM16-201ENST00000336708 TNFAIP3P21580 790 aa10.54□□□□□ -0.72
TRIM16-201ENST00000336708 CNGA1P29973 690 aa10.54□□□□□ -0.72
TRIM16-201ENST00000336708 ABCD1P33897 745 aa10.54□□□□□ -0.72
TRIM16-201ENST00000336708 GCLMP48507 274 aa10.54□□□□□ -0.72
TRIM16-201ENST00000336708 GPC3P51654 580 aa10.54□□□□□ -0.72
TRIM16-201ENST00000336708 TNNC1P63316 161 aa10.54□□□□□ -0.72
TRIM16-201ENST00000336708 SNRNP35Q16560 246 aaKnown RBP10.54□□□□□ -0.72
TRIM16-201ENST00000336708 NAIF1Q69YI7 327 aaPredicted RBP10.54□□□□□ -0.72
TRIM16-201ENST00000336708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRIM16-201ENST00000336708 PARD3BQ8TEW8 1205 aa10.54□□□□□ -0.72
TRIM16-201ENST00000336708 SH2D3AQ9BRG2 576 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms