RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 AMPD3Q01432 767 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 RNASELQ05823 741 aaKnown RBP18.02■□□□□ 0.48
C11orf88-201ENST00000332814 GPM6BQ13491 265 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 PTPROQ16827 1216 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 CSPP1Q1MSJ5 1256 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 NAALADL2Q58DX5 795 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 AXDND1Q5T1B0 1012 aaPredicted RBP18.02■□□□□ 0.48
C11orf88-201ENST00000332814 ATF7IP2Q5U623 682 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 FAM178BQ8IXR5 827 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 MAFAQ8NHW3 353 aaPredicted RBP18.02■□□□□ 0.48
C11orf88-201ENST00000332814 PDZD7Q9H5P4 517 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 RNF19AQ9NV58 838 aa18.02■□□□□ 0.48
C11orf88-201ENST00000332814 TYW1Q9NV66 732 aaKnown RBP18.02■□□□□ 0.48
C11orf88-201ENST00000332814 A0A087X0B3 334 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 H3BNC9 293 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 TRAK2O60296 914 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 IDEP14735 1019 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 ABCD1P33897 745 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 DCAF4L1Q3SXM0 396 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 NOMO2Q5JPE7 1267 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 RESP18Q5W5W9 173 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 MRPL10Q7Z7H8 261 aaKnown RBP18.01■□□□□ 0.47
C11orf88-201ENST00000332814 SLC17A8Q8NDX2 589 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 DDX12PQ92771 950 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 BICD1Q96G01 975 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 FAM193BQ96PV7 902 aaPredicted RBP18.01■□□□□ 0.47
C11orf88-201ENST00000332814 NTPCRQ9BSD7 190 aaKnown RBP18.01■□□□□ 0.47
C11orf88-201ENST00000332814 TCHPQ9BT92 498 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 TNMDQ9H2S6 317 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 PARP2Q9UGN5 583 aa18.01■□□□□ 0.47
C11orf88-201ENST00000332814 LAMA3Q16787 3333 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 C5orf67F2Z3F1 127 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 GAP43P17677 238 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 ZNF131P52739 623 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 NCKAP1LP55160 1127 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 ADGRE1Q14246 886 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 TPRNQ4KMQ1 711 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 AGMOQ6ZNB7 445 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 HAUS6Q7Z4H7 955 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 THNSL1Q8IYQ7 743 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 CEP57L1Q8IYX8 460 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 SMG8Q8ND04 991 aaKnown RBP18■□□□□ 0.47
C11orf88-201ENST00000332814 TMEM161BQ8NDZ6 487 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 ZNF558Q96NG5 402 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 NXF3Q9H4D5 531 aaKnown RBP18■□□□□ 0.47
C11orf88-201ENST00000332814 MAGEF1Q9HAY2 307 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 KANSL3Q9P2N6 904 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 HES2Q9Y543 173 aa18■□□□□ 0.47
C11orf88-201ENST00000332814 CARNS1A5YM72 827 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 MYMKA6NI61 221 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 MEIS3P2A8K0S8 358 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 POLR2DO15514 142 aaKnown RBP17.99■□□□□ 0.47
C11orf88-201ENST00000332814 OFD1O75665 1012 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 MAPTP10636 758 aaKnown RBP17.99■□□□□ 0.47
C11orf88-201ENST00000332814 PPM1AP35813 382 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 MATR3P43243 847 aaKnown RBP eCLIP17.99■□□□□ 0.47
C11orf88-201ENST00000332814 ZNF568Q3ZCX4 644 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 NT5DC1Q5TFE4 455 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 ADALQ6DHV7 355 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 COLGALT1Q8NBJ5 622 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 PPM1EQ8WY54 764 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 P2RX5Q93086 422 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 CHAMP1Q96JM3 812 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 RPS6KC1Q96S38 1066 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 GBP3Q9H0R5 595 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 LMAN2LQ9H0V9 348 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 LMCD1Q9NZU5 365 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 KCNH3Q9ULD8 1083 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
C11orf88-201ENST00000332814 TNFSF13BQ9Y275 285 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 USP20Q9Y2K6 914 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 GIT1Q9Y2X7 761 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 COL4A4P53420 1690 aaPredicted RBP17.99■□□□□ 0.47
C11orf88-201ENST00000332814 RALGAPA2Q2PPJ7 1873 aa17.99■□□□□ 0.47
C11orf88-201ENST00000332814 GOLGA6L4A6NEF3 574 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 TTLL13PA6NNM8 815 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 ZC3H11AO75152 810 aaKnown RBP eCLIP17.98■□□□□ 0.47
C11orf88-201ENST00000332814 LINC00271P0C7V0 271 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 CMA1P23946 247 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 MLH1P40692 756 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 ALDH7A1P49419 539 aaKnown RBP17.98■□□□□ 0.47
C11orf88-201ENST00000332814 E2F4Q16254 413 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 EEF1DP3Q658K8 133 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 SFR1Q86XK3 245 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 CCDC65Q8IXS2 484 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 KLHL23Q8NBE8 558 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 STAMQ92783 540 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 TARS2Q9BW92 718 aaKnown RBP17.98■□□□□ 0.47
C11orf88-201ENST00000332814 CWH43Q9H720 699 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 TBC1D13Q9NVG8 400 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 ANKFY1Q9P2R3 1169 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 HCSTQ9UBK5 93 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 SEL1LQ9UBV2 794 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 MTCH2Q9Y6C9 303 aa17.98■□□□□ 0.47
C11orf88-201ENST00000332814 HNRNPDLO14979 420 aaKnown RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 LPXNO60711 386 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 CSPG5O95196 566 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 POMCP01189 267 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 EDN1P05305 212 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 HARSP12081 509 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms