RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 PRPF4BQ13523 1007 aaKnown RBP13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 FILIP1LQ4L180 1135 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 SRGAP1Q7Z6B7 1085 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 FAM186BQ8IYM0 893 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 NME8Q8N427 588 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 ZSWIM2Q8NEG5 633 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 SAAL1Q96ER3 474 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 OSMRQ99650 979 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 ACO2Q99798 780 aaKnown RBP13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 NOC4LQ9BVI4 516 aaKnown RBP13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 HAPLN2Q9GZV7 340 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 CDHR5Q9HBB8 845 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 STARD7Q9NQZ5 370 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 GINS2Q9Y248 185 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 FRMD4BQ9Y2L6 1034 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 A0A0B4J269 797 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 ABLIM1O14639 778 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 TOM1L1O75674 476 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 PROZP22891 400 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 PTGISQ16647 500 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 SLFN12LQ6IEE8 588 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 TSHZ1Q6ZSZ6 1077 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 RPAINQ86UA6 219 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 ZBTB45Q96K62 511 aaPredicted RBP13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 FBXL18Q96ME1 805 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 GCOM2Q9BZD3 368 aaPredicted RBP13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 METTL14Q9HCE5 456 aaKnown RBP13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 TRMT13Q9NUP7 481 aaKnown RBP13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 ANKFY1Q9P2R3 1169 aa13.19□□□□□ -0.3
TRIM49B-201ENST00000332682 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 MAPK13O15264 365 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 TSPAN1O60635 241 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 ADRB2P07550 413 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 TPM2P07951 284 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 PBX1P40424 430 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 MRPS6P82932 125 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 SNX17Q15036 470 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 SNRNP35Q16560 246 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 VWA3BQ502W6 1294 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 ATF7IP2Q5U623 682 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 CBWD2Q8IUF1 395 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 VSTM4Q8IW00 320 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 TMEM40Q8WWA1 233 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 SLC35C1Q96A29 364 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 NDST4Q9H3R1 872 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 PTPRHQ9HD43 1115 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 TNFSF13BQ9Y275 285 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 FAM189A1O60320 539 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 RPLP2P05387 115 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 ARF4P18085 180 aaPredicted RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 EIF4BP23588 611 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 CRYBB1P53674 252 aaPredicted RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 MCL1Q07820 350 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 PTK7Q13308 1070 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 MPZL3Q6UWV2 235 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 RSPH3Q86UC2 560 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 GPD1LQ8N335 351 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 MSTO1Q9BUK6 570 aa13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 CELF4Q9BZC1 486 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 AGO2Q9UKV8 859 aaKnown RBP13.18□□□□□ -0.3
TRIM49B-201ENST00000332682 ARVCFO00192 962 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 CLDN3O15551 220 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 EXTL3O43909 919 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 B4GALT4O60513 344 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 ERLIN2O94905 339 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 SGPL1O95470 568 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 FGFR4P22455 802 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 UBXN1Q04323 297 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 PPP2R3AQ06190 1150 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 MGAT3Q09327 533 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 BFSP1Q12934 665 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 DCAF17Q5H9S7 520 aaPredicted RBP13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 SENP6Q9GZR1 1112 aaPredicted RBP13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 PDZD7Q9H5P4 517 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms