RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 FTLP02792 175 aaPredicted RBP16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 OAZ1P54368 228 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 CATSPERGQ6ZRH7 1159 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 RASGEF1CQ8N431 466 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 GOLGA6L1Q8N7Z2 621 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 SLC17A8Q8NDX2 589 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 PARD3BQ8TEW8 1205 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 KIFAP3Q92845 792 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 FAM84AQ96KN4 292 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 ACAD9Q9H845 621 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 XPNPEP1Q9NQW7 623 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 MAFGO15525 162 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 PEX10O60683 326 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 PSAPP07602 524 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 PRKCEQ02156 737 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 DCAF12L1Q5VU92 463 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 APOBEC3FQ8IUX4 373 aaKnown RBP16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 PCDHB18PQ96TA0 734 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 SLC9A2Q9UBY0 812 aa16.06■□□□□ 0.16
CLCNKA-201ENST00000331433 DDX3YO15523 660 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 CYP26A1O43174 497 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 ACTR2P61160 394 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 NNTQ13423 1086 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 ZSCAN26Q16670 478 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 NOP9Q86U38 636 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 SLC47A2Q86VL8 602 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 POMGNT1Q8WZA1 660 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 CALR3Q96L12 384 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 ZIM3Q96PE6 472 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 LTBP3Q9NS15 1303 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 ARID2Q68CP9 1835 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 SPDYE16A6NNV3 312 aaPredicted RBP16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 C19orf81C9J6K1 198 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 HNRNPDLO14979 420 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 HSF2BPO75031 334 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 FGGP02679 453 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 SP2Q02086 613 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 NAA35Q5VZE5 725 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 KRT39Q6A163 491 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 DDX42Q86XP3 938 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 TAS1R2Q8TE23 839 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 EPS8L1Q8TE68 723 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 SPIRE2Q8WWL2 714 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 NTPCRQ9BSD7 190 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 GOLGA6AQ9NYA3 693 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 TMOD4Q9NZQ9 345 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 AMACRQ9UHK6 382 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 NOCTQ9UK39 431 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 USP20Q9Y2K6 914 aa16.05■□□□□ 0.16
CLCNKA-201ENST00000331433 SSC5DA1L4H1 1573 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 DLATP10515 647 aaKnown RBP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 CHRNB2P17787 502 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ACTN2P35609 894 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 FSTL1Q12841 308 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 PRPF4BQ13523 1007 aaKnown RBP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 HLTFQ14527 1009 aaKnown RBP eCLIP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 FAM71AQ8IYT1 594 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ZNF526Q8TF50 670 aaPredicted RBP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 HVCN1Q96D96 273 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 RUFY1Q96T51 708 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 SH3GL2Q99962 352 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 PDLIM7Q9NR12 457 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 CYP26B1Q9NR63 512 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 CTTNBP2NLQ9P2B4 639 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 NR2E1Q9Y466 385 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 PMM2O15305 246 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ATMINO43313 823 aaPredicted RBP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 DGAT1O75907 488 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ZNF211Q13398 564 aaPredicted RBP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 MTERF2Q49AM1 385 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ALS2CLQ60I27 953 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ABHD15Q6UXT9 468 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 DLK2Q6UY11 383 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ADAT2Q7Z6V5 191 aaKnown RBP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ARL8AQ96BM9 186 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 PKNOX2Q96KN3 472 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ISCUQ9H1K1 167 aa16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 TAF1DQ9H5J8 278 aaPredicted RBP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 MYH9P35579 1960 aaKnown RBP16.04■□□□□ 0.16
CLCNKA-201ENST00000331433 ATP2A1O14983 1001 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 ECHS1P30084 290 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 TAS1R3Q7RTX0 852 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 FAM76AQ8TAV0 307 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 HELQQ8TDG4 1101 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 SHC3Q92529 594 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 ALG3Q92685 438 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 VTI1AQ96AJ9 217 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 BICD1Q96G01 975 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 POLR3FQ9H1D9 316 aaPredicted RBP16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 ATP6V0A4Q9HBG4 840 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 TMEM8AQ9HCN3 771 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 TMEM110-MUSTN1A8MSY1 372 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 SPATA31C2B4DYI2 1134 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 CCDC188H7C350 402 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 NFASCO94856 1347 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 KRT14P02533 472 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 MMEP08473 750 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 LCTP09848 1927 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms