RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 SEC14L1Q92503 715 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 CDC42EP4Q9H3Q1 356 aaKnown RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 PCIF1Q9H4Z3 704 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 ASTN1O14525 1302 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 PFASO15067 1338 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 PNMA6FA0A0J9YX94 578 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 PHF2O75151 1096 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 LDHCP07864 332 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 PYGMP11217 842 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 ATP2A2P16615 1042 aaKnown RBP8.46□□□□□ -1.05
VMA21-201ENST00000330374 COMTP21964 271 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 PCK1P35558 622 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 GNPTABQ3T906 1256 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 PRUNE1Q86TP1 453 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 CCDC125Q86Z20 511 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 UBL4BQ8N7F7 174 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 CARD9Q9H257 536 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 PCDHA1Q9Y5I3 950 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 ITGB4P16144 1822 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 ESYT2A0FGR8 921 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 SPAG7O75391 227 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 FAM13AO94988 1023 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 CHKAP35790 457 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 JAM2P57087 298 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 SLC8A3P57103 927 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 ZNF268Q14587 947 aaPredicted RBP8.46□□□□□ -1.05
VMA21-201ENST00000330374 COL23A1Q86Y22 540 aaPredicted RBP8.46□□□□□ -1.05
VMA21-201ENST00000330374 TPH2Q8IWU9 490 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 CYP2W1Q8TAV3 490 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 MTMR4Q9NYA4 1195 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 ADAM22Q9P0K1 906 aa8.46□□□□□ -1.05
VMA21-201ENST00000330374 GSTTP1A0A1W2PQM5 241 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 FAM187AA6NFU0 413 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 TMEM253P0C7T8 217 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 VCAM1P19320 739 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 TARSP26639 723 aaKnown RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 ZNF76P36508 570 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 PTGIRP43119 386 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 DHX34Q14147 1143 aaKnown RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 MPP2Q14168 576 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 DDB1Q16531 1140 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 EAPPQ56P03 285 aaPredicted RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 SAAL1Q96ER3 474 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 IFT74Q96LB3 600 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 OSBPL1AQ9BXW6 950 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 RTFDC1Q9BY42 306 aaPredicted RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 TAOK3Q9H2K8 898 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 UBE2TQ9NPD8 197 aaPredicted RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 KLHL14Q9P2G3 628 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 NKX1-2Q9UD57 310 aaPredicted RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 SNED1Q8TER0 1413 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 CLDN3O15551 220 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 CNGA1P29973 690 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 HOXA13P31271 388 aaPredicted RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 GJC1P36383 396 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 DSG2Q14126 1118 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 AGERQ15109 404 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 CRAMP1Q96RY5 1269 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 ANO3Q9BYT9 981 aa8.46□□□□□ -1.06
VMA21-201ENST00000330374 STMN4Q9H169 189 aaPredicted RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 TYW1Q9NV66 732 aaKnown RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 ZMYND8Q9ULU4 1186 aaPredicted RBP8.46□□□□□ -1.06
VMA21-201ENST00000330374 SHANK3Q9BYB0 1731 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 A0A0A6YYK5 440 aaPredicted RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 SH3BP5O60239 455 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 OATP04181 439 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 FMO5P49326 533 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 ERFP50548 548 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 UBXN2AP68543 259 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 PPATQ06203 517 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 SHROOM1Q2M3G4 852 aaPredicted RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 MFSD14BQ5SR56 506 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 CYP4F22Q6NT55 531 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 CRELD2Q6UXH1 353 aaPredicted RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 INTS8Q75QN2 995 aaKnown RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 IFNL1Q8IU54 200 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 SYCP3Q8IZU3 236 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 SPIRE2Q8WWL2 714 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 INTS2Q9H0H0 1204 aaKnown RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 SPATS2LQ9NUQ6 558 aaKnown RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 PDXKO00764 312 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 THAP12O43422 761 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 TOM1O60784 492 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 HIP1RO75146 1068 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 CALCAP01258 141 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 CCND1P24385 295 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 CYP4X1Q8N118 509 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 METTL14Q9HCE5 456 aaKnown RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 HAO1Q9UJM8 370 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 TRAF3IP3Q9Y228 551 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 ARL2BPQ9Y2Y0 163 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 A0A1W2PRG0 241 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 CHRNA3P32297 505 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 RAD23BP54727 409 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 ORC2Q13416 577 aaPredicted RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 ASPRV1Q53RT3 343 aa8.45□□□□□ -1.06
VMA21-201ENST00000330374 RPUSD2Q8IZ73 545 aaKnown RBP8.45□□□□□ -1.06
VMA21-201ENST00000330374 MAB21L3Q8N8X9 362 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms