RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CDCA2Q69YH5 1023 aaPredicted RBP19.67■□□□□ 0.74
HDDC3-201ENST00000330334 RNF135Q8IUD6 432 aa19.67■□□□□ 0.74
HDDC3-201ENST00000330334 HACE1Q8IYU2 909 aa19.67■□□□□ 0.74
HDDC3-201ENST00000330334 CPB2Q96IY4 423 aa19.67■□□□□ 0.74
HDDC3-201ENST00000330334 FAM193BQ96PV7 902 aaPredicted RBP19.67■□□□□ 0.74
HDDC3-201ENST00000330334 EIF2AQ9BY44 585 aaKnown RBP19.67■□□□□ 0.74
HDDC3-201ENST00000330334 FZD8Q9H461 694 aa19.67■□□□□ 0.74
HDDC3-201ENST00000330334 FAN1Q9Y2M0 1017 aa19.67■□□□□ 0.74
HDDC3-201ENST00000330334 GIT1Q9Y2X7 761 aa19.67■□□□□ 0.74
HDDC3-201ENST00000330334 HCFC2Q9Y5Z7 792 aa19.67■□□□□ 0.74
HDDC3-201ENST00000330334 ZMYM2Q9UBW7 1377 aa19.67■□□□□ 0.74
HDDC3-201ENST00000330334 ARL5CA6NH57 179 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 B4GALT3O60512 393 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 ITIH3Q06033 890 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 TPRNQ4KMQ1 711 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 SLC27A1Q6PCB7 646 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 POTEGQ6S5H5 508 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 PADI6Q6TGC4 694 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 IGSF22Q8N9C0 903 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 BCL7CQ8WUZ0 217 aaPredicted RBP19.66■□□□□ 0.74
HDDC3-201ENST00000330334 RAB34Q9BZG1 259 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 GBP3Q9H0R5 595 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 C2orf40Q9H1Z8 148 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 RNF39Q9H2S5 420 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 UPF2Q9HAU5 1272 aaKnown RBP19.66■□□□□ 0.74
HDDC3-201ENST00000330334 GPRC5CQ9NQ84 441 aa19.66■□□□□ 0.74
HDDC3-201ENST00000330334 PRMT7Q9NVM4 692 aaPredicted RBP19.66■□□□□ 0.74
HDDC3-201ENST00000330334 ARHGEF35A5YM69 484 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 POMCP01189 267 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 MCM2P49736 904 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 DSC1Q08554 894 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 PTGDRQ13258 359 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 PPFIBP1Q86W92 1011 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 COLGALT2Q8IYK4 626 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 GAD1Q99259 594 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 VN1R3Q9BXE9 311 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 TRIM6Q9C030 488 aaPredicted RBP19.65■□□□□ 0.74
HDDC3-201ENST00000330334 ADAM7Q9H2U9 754 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 LRWD1Q9UFC0 647 aa19.65■□□□□ 0.74
HDDC3-201ENST00000330334 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.64■□□□□ 0.73
HDDC3-201ENST00000330334 LRRIQ4A6NIV6 560 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 NRP1O14786 923 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 B4GALT5O43286 388 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 LILRB3O75022 631 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 CCT6AP40227 531 aaKnown RBP19.64■□□□□ 0.73
HDDC3-201ENST00000330334 PRPHP41219 470 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 LLGL2Q6P1M3 1020 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 MAEAQ7L5Y9 396 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 ZBTB8OSQ8IWT0 167 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 TMEM87AQ8NBN3 555 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 TMX3Q96JJ7 454 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 PCDHB6Q9Y5E3 794 aa19.64■□□□□ 0.73
HDDC3-201ENST00000330334 FAM86C2PA6NEL3 165 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 EFEMP2O95967 443 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 MLH1P40692 756 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 NAMPTP43490 491 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 NBR1Q14596 966 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 PPP2R5AQ15172 486 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 PTPN14Q15678 1187 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 ECM1Q16610 540 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 RILPL1Q5EBL4 403 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 CES5AQ6NT32 575 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 GSTCDQ8NEC7 633 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 SLC22A17Q8WUG5 538 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 NECTIN4Q96NY8 510 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 DZANK1Q9NVP4 752 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 MUTYHQ9UIF7 546 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 SSX2IPQ9Y2D8 614 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 HCN4Q9Y3Q4 1203 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 HES2Q9Y543 173 aa19.63■□□□□ 0.73
HDDC3-201ENST00000330334 ACKR2O00590 384 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 NR1I2O75469 434 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 MAPK6Q16659 721 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 EDAQ92838 391 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 KIFAP3Q92845 792 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 ZFP42Q96MM3 310 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 EMILIN2Q9BXX0 1053 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 BHMT2Q9H2M3 363 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 NXF3Q9H4D5 531 aaKnown RBP19.62■□□□□ 0.73
HDDC3-201ENST00000330334 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.62■□□□□ 0.73
HDDC3-201ENST00000330334 MIOSQ9NXC5 875 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 RAPGEFL1Q9UHV5 662 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 KIAA1024Q9UPX6 916 aa19.62■□□□□ 0.73
HDDC3-201ENST00000330334 N4BP3O15049 544 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 SOD2P04179 222 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 EFNA5P52803 228 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 DTHD1Q6ZMT9 781 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 GPR65Q8IYL9 337 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 RNF168Q8IYW5 571 aaPredicted RBP19.61■□□□□ 0.73
HDDC3-201ENST00000330334 KCTD17Q8N5Z5 321 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 AUTS2Q8WXX7 1259 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 BSNDQ8WZ55 320 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 RPGRIP1Q96KN7 1286 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 CCDC113Q9H0I3 377 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 MRPL17Q9NRX2 175 aaKnown RBP19.61■□□□□ 0.73
HDDC3-201ENST00000330334 MARCH5Q9NX47 278 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 DNM3Q9UQ16 869 aa19.61■□□□□ 0.73
HDDC3-201ENST00000330334 NPTXRO95502 500 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 C1RP00736 705 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 CA8P35219 290 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms