RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 RBM41Q96IZ5 413 aaKnown RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 OLFML3Q9NRN5 406 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 CABIN1Q9Y6J0 2220 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SPATA31D1Q6ZQQ2 1576 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SERPINB2P05120 415 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 GPS1Q13098 491 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ARHGAP27Q6ZUM4 889 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SNX24Q9Y343 169 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SRGNP10124 158 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 POLGP54098 1239 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ALCAMQ13740 583 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 WASHC2DQ5SRD0 308 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 NR1H4Q96RI1 486 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 THTPAQ9BU02 230 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 EDEM3Q9BZQ6 932 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 PABPC3Q9H361 631 aaKnown RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 GPCPD1Q9NPB8 672 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ZNF277Q9NRM2 450 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 KDM6AO15550 1401 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 IRF6O14896 467 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 TNFAIP8O95379 198 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 HSPA1AP0DMV8 641 aaKnown RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 HSPA1BP0DMV9 641 aaKnown RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ALDH18A1P54886 795 aaKnown RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 DCTN2Q13561 401 aaKnown RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 CYTH1Q15438 398 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 TPH2Q8IWU9 490 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 GJA10Q969M2 543 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 PPP1R14BQ96C90 147 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 GDAQ9Y2T3 454 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 WDR17Q8IZU2 1322 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 POTEFA5A3E0 1075 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 CFLARO15519 480 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 CLASP2O75122 1294 aaKnown RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 POTEIP0CG38 1075 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ELF3P78545 371 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 POTEEQ6S8J3 1075 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 RAD9BQ6WBX8 426 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 PNMA1Q8ND90 353 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 GSTA4O15217 222 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 KRT1P04264 644 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SRGAP2BP0DMP2 458 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ITGB3BPQ13352 177 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 LRRC36Q1X8D7 754 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ARMC3Q5W041 872 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 RAB44Q7Z6P3 723 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 RSPH3Q86UC2 560 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SFR1Q86XK3 245 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 NBPF15Q8N660 670 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 PSTPIP2Q9H939 334 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SMYD2Q9NRG4 433 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 NALCNQ8IZF0 1738 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ZNF609O15014 1411 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SMARCA1P28370 1054 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ADARP55265 1226 aaKnown RBP7.48□□□□□ -1.21
SMC1A-201ENST00000322213 KRT17Q04695 432 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 B3GNT6Q6ZMB0 384 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 TMCO5AQ8N6Q1 288 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 CASKIN2Q8WXE0 1202 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 CENPTQ96BT3 561 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 BRD8Q9H0E9 1235 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 KIF17Q9P2E2 1029 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 FOCADQ5VW36 1801 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 NUP107P57740 925 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 MAP3K10Q02779 954 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 SPDYCQ5MJ68 293 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 TRIM59Q8IWR1 403 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 LY9Q9HBG7 655 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 CYP4F11Q9HBI6 524 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 ATP8A2Q9NTI2 1148 aa7.48□□□□□ -1.21
SMC1A-201ENST00000322213 TNRQ92752 1358 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 HSPA4LO95757 839 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 ATP6V1B1P15313 513 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 CARSP49589 748 aaKnown RBP7.47□□□□□ -1.21
SMC1A-201ENST00000322213 PPP2R5DQ14738 602 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 NCAPHQ15003 741 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 KIRREL3Q8IZU9 778 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 NMD3Q96D46 503 aaKnown RBP7.47□□□□□ -1.21
SMC1A-201ENST00000322213 RANBP17Q9H2T7 1088 aaKnown RBP7.47□□□□□ -1.21
SMC1A-201ENST00000322213 UBE2TQ9NPD8 197 aaPredicted RBP7.47□□□□□ -1.21
SMC1A-201ENST00000322213 ADA2Q9NZK5 511 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 ATP11BQ9Y2G3 1177 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 TJP1Q07157 1748 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 DOCK2Q92608 1830 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 CBFA2T3O75081 653 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 KLHL2O95198 593 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 CASP2P42575 452 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 TUBA4AP68366 448 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 ATP2C1P98194 919 aaPredicted RBP7.47□□□□□ -1.21
SMC1A-201ENST00000322213 RABGAP1LQ5R372 815 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 ADCK1Q86TW2 530 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 CYGBQ8WWM9 190 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 BTBD6Q96KE9 485 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 BRIP1Q9BX63 1249 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 KLC2Q9H0B6 622 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 WHRNQ9P202 907 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 ZBTB21Q9ULJ3 1066 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 UBOX5O94941 541 aa7.47□□□□□ -1.21
SMC1A-201ENST00000322213 LONRF1Q17RB8 773 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms