RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 SHMT1P34896 483 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ABCB6Q9NP58 842 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 STAP1Q9ULZ2 295 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 A8MXQ7 604 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RTN2O75298 545 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SF3A3Q12874 501 aaKnown RBP eCLIP13.69□□□□□ -0.222e-6■■■■□ 23.7
SH3PXD2A-201ENST00000315994 PPP6R3Q5H9R7 873 aaPredicted RBP13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RAET1EQ8TD07 263 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ERAP1Q9NZ08 941 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SLIT3O75094 1523 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SSU72P8A0A1W2PR75 194 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 KRT7P08729 469 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 GRB10Q13322 594 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 TMED2Q15363 201 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 NBPF9Q3BBW0 867 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 Q4G0T1 1027 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 TEX2Q8IWB9 1127 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 TRIM42Q8IWZ5 723 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 DDX56Q9NY93 547 aaKnown RBP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PIN4Q9Y237 131 aaKnown RBP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 USP27XA6NNY8 438 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PPP1R3GB7ZBB8 358 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 HBP1O60381 514 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CASP8Q14790 479 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PLCB4Q15147 1175 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ERO1BQ86YB8 467 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 EFCAB13Q8IY85 973 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 C17orf75Q9HAS0 396 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PARVAQ9NVD7 372 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 NFU1Q9UMS0 254 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CELF2O95319 508 aaKnown RBP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 TOB1P50616 345 aaPredicted RBP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ZC2HC1CQ53FD0 456 aaPredicted RBP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 IER5Q5VY09 327 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PCGF5Q86SE9 256 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.68□□□□□ -0.224e-8■□□□□ 11
SH3PXD2A-201ENST00000315994 KLC2Q9H0B6 622 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CNOT10Q9H9A5 744 aaKnown RBP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CYP26A1O43174 497 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 TPD52P55327 224 aaPredicted RBP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 LAMC2Q13753 1193 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PKN1Q16512 942 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RAPH1Q70E73 1250 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SPATA24Q86W54 205 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 A0A1W2PQJ5 194 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RASGRF2O14827 1237 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 UCHL3P15374 230 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 HUNKP57058 714 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 C9orf131Q5VYM1 1079 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 NFRKBQ6P4R8 1299 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RHOT1Q8IXI2 618 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
SH3PXD2A-201ENST00000315994 KRT10P13645 584 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ACOT2P49753 483 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SLC18A3Q16572 532 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MUM1L1Q5H9M0 696 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 EXOC1LA0A1B0GW35 172 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 P4HA2O15460 535 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CAV1Q03135 178 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 THOC5Q13769 683 aaKnown RBP13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MAP7Q14244 749 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 BBS9Q3SYG4 887 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RWDD4Q6NW29 188 aaKnown RBP13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 HPSEQ9Y251 543 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RBP5P82980 135 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 COG7P83436 770 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RPS6KA2Q15349 733 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 DACT2Q5SW24 774 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PYROXD1Q8WU10 500 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 TNIP3Q96KP6 325 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 HEMGNQ9BXL5 484 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 NCK2O43639 380 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CSPG5O95196 566 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 IL18RAPO95256 599 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SREBF2Q12772 1141 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SGSM1Q2NKQ1 1148 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SCN4BQ8IWT1 228 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RYBPQ8N488 228 aaPredicted RBP13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 FAF2Q96CS3 445 aa13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MED1Q15648 1581 aaPredicted RBP13.67□□□□□ -0.22
SH3PXD2A-201ENST00000315994 STK25O00506 426 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 GAS2O43903 313 aaKnown RBP13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 VCAM1P19320 739 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ACTR2P61160 394 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ADCY2Q08462 1091 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 NNTQ13423 1086 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ANKS1AQ92625 1134 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 BCAP29Q9UHQ4 241 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RIC1Q4ADV7 1423 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MT-ND3P03897 115 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CYP11B2P19099 503 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ADORA2BP29275 332 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CHRNA3P32297 505 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 DGKDQ16760 1214 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 C6orf118Q5T5N4 469 aa13.66□□□□□ -0.22
SH3PXD2A-201ENST00000315994 KIF9Q9HAQ2 790 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms