RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ATF7IP2Q5U623 682 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 NME8Q8N427 588 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 AFAP1L1Q8TED9 768 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 PIK3CDO00329 1044 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 GAS2O43903 313 aaKnown RBP14.66□□□□□ -0.06
DDX54-202ENST00000314045 ATF2P15336 505 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 GUCY2CP25092 1073 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 PPP2R5CQ13362 524 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 DGKZQ13574 1117 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 KYAT1Q16773 422 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 NT5DC1Q5TFE4 455 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 VSIG10LQ86VR7 867 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 KIAA0895Q8NCT3 520 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 WNT7AO00755 349 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 EVI5O60447 810 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 SLC18A3Q16572 532 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 PRPF31Q8WWY3 499 aaKnown RBP14.66□□□□□ -0.06
DDX54-202ENST00000314045 AGPAT1Q99943 283 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 AP1M1Q9BXS5 423 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 PDE11AQ9HCR9 933 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 AGAP1Q9UPQ3 857 aa14.66□□□□□ -0.06
DDX54-202ENST00000314045 RRN3P2A6NIE6 340 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 MIF4GDA9UHW6 222 aaKnown RBP14.65□□□□□ -0.06
DDX54-202ENST00000314045 RGS2P41220 211 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 ALDH5A1P51649 535 aaPredicted RBP14.65□□□□□ -0.06
DDX54-202ENST00000314045 CLCN3P51790 818 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
DDX54-202ENST00000314045 CDKAL1Q5VV42 579 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 CBWD1Q9BRT8 395 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 KCNMB3Q9NPA1 279 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 STRNO43815 780 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 PRPSAP2O60256 369 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 FGGP02679 453 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 LMNB2Q03252 620 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 PPIL2Q13356 520 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 SH3RF1Q7Z6J0 888 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 MTMR14Q8NCE2 650 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 UHMK1Q8TAS1 419 aaKnown RBP14.65□□□□□ -0.06
DDX54-202ENST00000314045 OLFML3Q9NRN5 406 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 RARBP10826 455 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 PSMA2P25787 234 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 DYNLT1P63172 113 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 NKX2-3Q8TAU0 364 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 ZC3H15Q8WU90 426 aaKnown RBP14.65□□□□□ -0.06
DDX54-202ENST00000314045 AFG1LQ8WV93 481 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 WDR24Q96S15 920 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 DNAJC18Q9H819 358 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 KCNH4Q9UQ05 1017 aa14.65□□□□□ -0.06
DDX54-202ENST00000314045 ZBTB39O15060 712 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 AP5Z1O43299 807 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 ATP2C2O75185 946 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 MAN1A1P33908 653 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 PMS1P54277 932 aaKnown RBP14.64□□□□□ -0.07
DDX54-202ENST00000314045 LY6KQ17RY6 165 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 CEP85LQ5SZL2 805 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 PARD6BQ9BYG5 372 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 RSPH14Q9UHP6 348 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 EXTL3O43909 919 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 ZRANB2O95218 330 aaKnown RBP eCLIP14.64□□□□□ -0.07
DDX54-202ENST00000314045 HLA-DRAP01903 254 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 CALB1P05937 261 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 ZNF18P17022 549 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 CDO1Q16878 200 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 KLHDC7AQ5VTJ3 777 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 CBWD2Q8IUF1 395 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 TNFRSF25Q93038 417 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 TMEM8AQ9HCN3 771 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 CALCOCO1Q9P1Z2 691 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 DBR1Q9UK59 544 aaKnown RBP14.64□□□□□ -0.07
DDX54-202ENST00000314045 SSX2IPQ9Y2D8 614 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 ASTN2O75129 1339 aaPredicted RBP14.64□□□□□ -0.07
DDX54-202ENST00000314045 KRT15P19012 456 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 OAS2P29728 719 aaKnown RBP14.64□□□□□ -0.07
DDX54-202ENST00000314045 ERVK-9P63128 1117 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 ERVK-24P63145 666 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 TTC39CQ8N584 583 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 CLMNQ96JQ2 1002 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 RUNDC3BQ96NL0 473 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.64□□□□□ -0.07
DDX54-202ENST00000314045 PABPN1LA6NDY0 278 aaKnown RBP14.64□□□□□ -0.07
DDX54-202ENST00000314045 FCGRTP55899 365 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 TRIM72Q6ZMU5 477 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 CTAGE3PQ8IX95 158 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 KCTD6Q8NC69 237 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 ZNF564Q8TBZ8 553 aaPredicted RBP14.64□□□□□ -0.07
DDX54-202ENST00000314045 RFFLQ8WZ73 363 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 PPANQ9NQ55 473 aaKnown RBP14.64□□□□□ -0.07
DDX54-202ENST00000314045 CYP39A1Q9NYL5 469 aa14.64□□□□□ -0.07
DDX54-202ENST00000314045 CYP3A7-CYP3A51PA0A087WV96 503 aa14.63□□□□□ -0.07
DDX54-202ENST00000314045 CCDC151A5D8V7 595 aa14.63□□□□□ -0.07
DDX54-202ENST00000314045 TMEM150BA6NC51 233 aa14.63□□□□□ -0.07
DDX54-202ENST00000314045 PPP1R11O60927 126 aaPredicted RBP14.63□□□□□ -0.07
DDX54-202ENST00000314045 CYP3A7P24462 503 aa14.63□□□□□ -0.07
DDX54-202ENST00000314045 KLRC1P26715 233 aa14.63□□□□□ -0.07
DDX54-202ENST00000314045 PLTPP55058 493 aa14.63□□□□□ -0.07
DDX54-202ENST00000314045 MRPS25P82663 173 aaKnown RBP14.63□□□□□ -0.07
DDX54-202ENST00000314045 PALM2Q8IXS6 379 aa14.63□□□□□ -0.07
DDX54-202ENST00000314045 BBOF1Q8ND07 529 aa14.63□□□□□ -0.07
DDX54-202ENST00000314045 PURBQ96QR8 312 aaKnown RBP14.63□□□□□ -0.07
DDX54-202ENST00000314045 NUP85Q9BW27 656 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms