RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 BRD1O95696 1058 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 HOXA11P31270 313 aaPredicted RBP9.08□□□□□ -0.96
TPM3-203ENST00000312970 NEK4P51957 841 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 PTPN5P54829 565 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 ITIH3Q06033 890 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 SPIRE1Q08AE8 756 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 NCBP1Q09161 790 aaKnown RBP9.08□□□□□ -0.96
TPM3-203ENST00000312970 CTTNQ14247 550 aaKnown RBP9.08□□□□□ -0.96
TPM3-203ENST00000312970 MXD4Q14582 209 aaPredicted RBP9.08□□□□□ -0.96
TPM3-203ENST00000312970 PCBP1Q15365 356 aaKnown RBP eCLIP9.08□□□□□ -0.966e-17■■□□□ 14.2
TPM3-203ENST00000312970 ME3Q16798 604 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 ERICH6BQ5W0A0 696 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 AGMOQ6ZNB7 445 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 FERMT3Q86UX7 667 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 NECAB1Q8N987 351 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 RNF149Q8NC42 400 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 CNNM3Q8NE01 707 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 URGCPQ8TCY9 931 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 TNFRSF25Q93038 417 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 GTF3C6Q969F1 213 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 PBXIP1Q96AQ6 731 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 IGSF21Q96ID5 467 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 FAM193BQ96PV7 902 aaPredicted RBP9.08□□□□□ -0.96
TPM3-203ENST00000312970 HSD17B14Q9BPX1 270 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 EIF2AK1Q9BQI3 630 aaKnown RBP9.08□□□□□ -0.96
TPM3-203ENST00000312970 ADAM7Q9H2U9 754 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 MINDY3Q9H8M7 445 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 FAM86C1Q9NVL1 165 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 STK39Q9UEW8 545 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 INPP5FQ9Y2H2 1132 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 HCFC2Q9Y5Z7 792 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 CNTNAP2Q9UHC6 1331 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 FAM205CA6NFA0 338 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 BTBD18B2RXH4 712 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 GFRA3O60609 400 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 ERLIN2O94905 339 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 LYPLA2O95372 231 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 CTSAP10619 480 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 AXLP30530 894 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 TXKP42681 527 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 SLC11A1P49279 550 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 FOXK2Q01167 660 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 CYP4A11Q02928 519 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 POU5F1BQ06416 359 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 TRIM29Q14134 588 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 EMC2Q15006 297 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 CALCRLQ16602 461 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 PPFIBP1Q86W92 1011 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 TMEM173Q86WV6 379 aaPredicted RBP9.07□□□□□ -0.96
TPM3-203ENST00000312970 ZNF280BQ86YH2 543 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 NECTIN4Q96NY8 510 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 MTRQ99707 1265 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 GBP3Q9H0R5 595 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 ZBP1Q9H171 429 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 TTC12Q9H892 705 aaPredicted RBP9.07□□□□□ -0.96
TPM3-203ENST00000312970 RSAD1Q9HA92 442 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 UBN1Q9NPG3 1134 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 BMP2KQ9NSY1 1161 aaPredicted RBP9.07□□□□□ -0.96
TPM3-203ENST00000312970 ANKEF1Q9NU02 776 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 DNAJB4Q9UDY4 337 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 FAN1Q9Y2M0 1017 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 NR2E1Q9Y466 385 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 GVINP1Q7Z2Y8 2422 aa9.07□□□□□ -0.96
TPM3-203ENST00000312970 PLXNA3P51805 1871 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 EPG5Q9HCE0 2579 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.06□□□□□ -0.96
TPM3-203ENST00000312970 DGAT1O75907 488 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 DDHD2O94830 711 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 LARGE1O95461 756 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 XRCC6P12956 609 aaKnown RBP eCLIP9.06□□□□□ -0.969e-13■□□□□ 8.6
TPM3-203ENST00000312970 ITGA4P13612 1032 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 NCLP19338 710 aaKnown RBP9.06□□□□□ -0.96
TPM3-203ENST00000312970 CLCN1P35523 988 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 MTHFRP42898 656 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 PTENP60484 403 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 SIGLEC14Q08ET2 396 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 TFDP1Q14186 410 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 PTPN21Q16825 1174 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 ATAT1Q5SQI0 421 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 UBXN11Q5T124 520 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 ZBTB33Q86T24 672 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 DIS3L2Q8IYB7 885 aaKnown RBP9.06□□□□□ -0.96
TPM3-203ENST00000312970 NSUN7Q8NE18 718 aaKnown RBP9.06□□□□□ -0.96
TPM3-203ENST00000312970 SLC22A17Q8WUG5 538 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 AUTS2Q8WXX7 1259 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 RIPOR3Q96MK2 946 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 TMEM175Q9BSA9 504 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 REPIN1Q9BWE0 567 aaKnown RBP9.06□□□□□ -0.96
TPM3-203ENST00000312970 DZANK1Q9NVP4 752 aa9.06□□□□□ -0.96
TPM3-203ENST00000312970 CACNA1BQ00975 2339 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 INO80B-WBP1J3KQ70 363 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 NRP1O14786 923 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 NEMFO60524 1076 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 JAK2O60674 1132 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 POMCP01189 267 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 EPCAMP16422 314 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 KLRC2P26717 231 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 ARL2P36404 184 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 AFF1P51825 1210 aaKnown RBP9.05□□□□□ -0.96
TPM3-203ENST00000312970 RARS2Q5T160 578 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms