RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SYBUQ9NX95 663 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 KITP10721 976 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 SLC1A1P43005 524 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 HSD17B4P51659 736 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 STAT4Q14765 748 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 KRT31Q15323 416 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
HCFC1-201ENST00000310441 PARVAQ9NVD7 372 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 NRBP1Q9UHY1 535 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 SLC4A7Q9Y6M7 1214 aa16.37■□□□□ 0.21
HCFC1-201ENST00000310441 H0YC42 278 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 HPCAP84074 193 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 KLC4Q9NSK0 619 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 ZFATQ9P243 1243 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 VCAM1P19320 739 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 RAD23BP54727 409 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 XXYLT1Q8NBI6 393 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 KRT35Q92764 455 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 DCUN1D1Q96GG9 259 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 IFNAR1P17181 557 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 RANBP1P43487 201 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 CCDC142Q17RM4 750 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 FASTKD1Q53R41 847 aaKnown RBP16.36■□□□□ 0.21
HCFC1-201ENST00000310441 VPS11Q9H270 941 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 ARL2BPQ9Y2Y0 163 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 HEY1Q9Y5J3 304 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 TCP10L2B9ZVM9 353 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 APOL1O14791 398 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
HCFC1-201ENST00000310441 VCPP55072 806 aaKnown RBP16.36■□□□□ 0.21
HCFC1-201ENST00000310441 E2F4Q16254 413 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 MAPK6Q16659 721 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 AGBL1Q96MI9 1066 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 OSBPL9Q96SU4 736 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 LGALS16A8MUM7 142 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 GGCXP38435 758 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 RHOT1Q8IXI2 618 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 CASS4Q9NQ75 786 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 PAPOLBQ9NRJ5 636 aaKnown RBP16.36■□□□□ 0.21
HCFC1-201ENST00000310441 SLC9A2Q9UBY0 812 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 ATP7BP35670 1465 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 SFNP31947 248 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 GJC2Q5T442 439 aaPredicted RBP16.36■□□□□ 0.21
HCFC1-201ENST00000310441 CCNYL1Q8N7R7 359 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 BTN2A2Q8WVV5 523 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 NLRP4Q96MN2 994 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 KCNK16Q96T55 309 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 CLIC2O15247 247 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 COPB2P35606 906 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 POU5F1BQ06416 359 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 PKN3Q6P5Z2 889 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 SCN3BQ9NY72 215 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 WDR19Q8NEZ3 1342 aa16.36■□□□□ 0.21
HCFC1-201ENST00000310441 SPAG6O75602 509 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 TRIP4Q15650 581 aaPredicted RBP16.35■□□□□ 0.21
HCFC1-201ENST00000310441 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 RCOR1Q9UKL0 485 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 AP4S1Q9Y587 144 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 BCAMP50895 628 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 CHRNDQ07001 517 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 STK36Q9NRP7 1315 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 SMAPO00193 183 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 OTULINQ96BN8 352 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 SRPK1Q96SB4 655 aaKnown RBP16.35■□□□□ 0.21
HCFC1-201ENST00000310441 AURKCQ9UQB9 309 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 SPDYE7PQ495Y7 208 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 KIAA0825Q8IV33 1275 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 APPL2Q8NEU8 664 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 VPS37AQ8NEZ2 397 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 VPS9D1Q9Y2B5 631 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 ZNF711Q9Y462 761 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 H7C0S8 307 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 H2AFYO75367 372 aaKnown RBP16.35■□□□□ 0.21
HCFC1-201ENST00000310441 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 CLCA2Q9UQC9 943 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 TYK2P29597 1187 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
HCFC1-201ENST00000310441 AGGF1Q8N302 714 aaeCLIP16.35■□□□□ 0.21
HCFC1-201ENST00000310441 OR6B3Q8NGW1 331 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 VPS50Q96JG6 964 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 MAP3K20Q9NYL2 800 aaKnown RBP16.35■□□□□ 0.21
HCFC1-201ENST00000310441 CNOT8Q9UFF9 292 aaKnown RBP16.35■□□□□ 0.21
HCFC1-201ENST00000310441 TSC22D4Q9Y3Q8 395 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 PGM1P36871 562 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 TBC1D22BQ9NU19 505 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 RGL1Q9NZL6 768 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 APPL1Q9UKG1 709 aa16.35■□□□□ 0.21
HCFC1-201ENST00000310441 KLHL2O95198 593 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 PDCD6IPQ8WUM4 868 aaKnown RBP16.34■□□□□ 0.21
HCFC1-201ENST00000310441 EME1Q96AY2 570 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 CNPY3Q9BT09 278 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 KCNA2P16389 499 aa16.34■□□□□ 0.21
HCFC1-201ENST00000310441 PAGE5Q96GU1 130 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms