RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NR2F2P24468 414 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 SLC16A2P36021 539 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 Q3C1V9 767 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 SBK1Q52WX2 424 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 FAM186BQ8IYM0 893 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 GFM2Q969S9 779 aaKnown RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 CHMP6Q96FZ7 201 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 MMS19Q96T76 1030 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 BATF3Q9NR55 127 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 COX16Q9P0S2 106 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 RASA4BC9J798 803 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 RASA4O43374 803 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 DAB1O75553 588 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 GH1P01241 217 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 TNNC2P02585 160 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 BFSP2Q13515 415 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 IQCB1Q15051 598 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 LRRC41Q15345 812 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 BBS9Q3SYG4 887 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 OLFML2BQ68BL8 750 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 PPP1R18Q6NYC8 613 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 DARS2Q6PI48 645 aaKnown RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 MYLK4Q86YV6 388 aaPredicted RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 PYROXD1Q8WU10 500 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 SKA2Q8WVK7 121 aaPredicted RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 ZKSCAN4Q969J2 545 aaPredicted RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 TRIM11Q96F44 468 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 CCDC90BQ9GZT6 254 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 APOBEC2Q9Y235 224 aaKnown RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 PCDHB4Q9Y5E5 795 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 LRRN2O75325 713 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 JAK3P52333 1124 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 HDAC4P56524 1084 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 NOP14P78316 857 aaKnown RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 CUL4AQ13619 759 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 PKN2Q16513 984 aaKnown RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 C12orf60Q5U649 245 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 CENPUQ71F23 418 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 GIPC2Q8TF65 315 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 PUS7LQ9H0K6 701 aaKnown RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 THAP9Q9H5L6 903 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 RCOR1Q9UKL0 485 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 SALL1Q9NSC2 1324 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 HSPA4LO95757 839 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 FGGP02679 453 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 TRPC1P48995 793 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 EPHB1P54762 984 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 OCRLQ01968 901 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 FOXD4Q12950 439 aaPredicted RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 PDXDC2PQ6P474 469 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 SARM1Q6SZW1 724 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 LINC00301Q8NCQ3 95 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 TGS1Q96RS0 853 aaKnown RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 MYPNQ86TC9 1320 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 E9PMD0 336 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 ZBTB5O15062 677 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 C4orf50Q6ZRC1 276 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 ATG9AQ7Z3C6 839 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 WDR75Q8IWA0 830 aaKnown RBP8.72□□□□□ -1.01
VPS41-202ENST00000310301 URGCPQ8TCY9 931 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 SCFD2Q8WU76 684 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 TBC1D22BQ9NU19 505 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
VPS41-202ENST00000310301 ZNF521Q96K83 1311 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 MEFVO15553 781 aaPredicted RBP8.71□□□□□ -1.01
VPS41-202ENST00000310301 DIAPH2O60879 1101 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 SERPINI2O75830 405 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 BPIFB4P59827 614 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 KRT31Q15323 416 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 NSUN7Q8NE18 718 aaKnown RBP8.71□□□□□ -1.01
VPS41-202ENST00000310301 ATP6V1G3Q96LB4 118 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 NT5C1BQ96P26 610 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 EHD4Q9H223 541 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 CUEDC2Q9H467 287 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 SUCLA2Q9P2R7 463 aaPredicted RBP8.71□□□□□ -1.01
VPS41-202ENST00000310301 STX18Q9P2W9 335 aaKnown RBP8.71□□□□□ -1.01
VPS41-202ENST00000310301 STK17AQ9UEE5 414 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 SNX24Q9Y343 169 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 DENND3A2RUS2 1198 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 GTPBP10A4D1E9 387 aaKnown RBP8.71□□□□□ -1.01
VPS41-202ENST00000310301 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.01
VPS41-202ENST00000310301 PALMO75781 387 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 OATP04181 439 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 PSMC2P35998 433 aaKnown RBP8.71□□□□□ -1.01
VPS41-202ENST00000310301 KIF19Q2TAC6 998 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 FSCBQ5H9T9 825 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 TMEM154Q6P9G4 183 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 OSBP2Q969R2 916 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 FOXP1Q9H334 677 aaPredicted RBP8.71□□□□□ -1.01
VPS41-202ENST00000310301 SAYSD1Q9NPB0 183 aa8.71□□□□□ -1.01
VPS41-202ENST00000310301 CCDC188H7C350 402 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 IPO5O00410 1097 aaKnown RBP8.71□□□□□ -1.02
VPS41-202ENST00000310301 COPEO14579 308 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 ORC4O43929 436 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 KRT75O95678 551 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 KPNA2P52292 529 aaKnown RBP8.71□□□□□ -1.02
VPS41-202ENST00000310301 GUCY1A3Q02108 690 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 DRP2Q13474 957 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 GNASQ5JWF2 1037 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms