RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 PHKA2P46019 1235 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 ADAM17P78536 824 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 PURAQ00577 322 aaKnown RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 CDC42EP1Q00587 391 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 TRIM32Q13049 653 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 FAM187BQ17R55 369 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 TSR1Q2NL82 804 aaKnown RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 DPY19L2P1Q6NXN4 242 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 USP37Q86T82 979 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 TMTC1Q8IUR5 882 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 SAAL1Q96ER3 474 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 ERO1AQ96HE7 468 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 NLRP4Q96MN2 994 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 ACO2Q99798 780 aaKnown RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 LSM14BQ9BX40 385 aaKnown RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 IFT122Q9HBG6 1241 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 CEP72Q9P209 647 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 AGO2Q9UKV8 859 aaKnown RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 ZNF233A6NK53 670 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 N4BP1O75113 896 aaKnown RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 TOM1L1O75674 476 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 LDHAP00338 332 aaKnown RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 HMGCRP04035 888 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 C6orf222P0C671 652 aaPredicted RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 TRIM49P0CI25 452 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 TRIM49CP0CI26 452 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 PON1P27169 355 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 HTRA3P83110 453 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 MBTD1Q05BQ5 628 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 CYP24A1Q07973 514 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 ARHGEF6Q15052 776 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 MEA1Q16626 185 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 C1orf220Q5T0J3 134 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 MAP3K21Q5TCX8 1036 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 NFRKBQ6P4R8 1299 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 C17orf53Q8N3J3 647 aaPredicted RBP15.36■□□□□ 0.05
SS18-201ENST00000269137 PLEKHO2Q8TD55 490 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 PXYLP1Q8TE99 480 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 BAP1Q92560 729 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 AKT3Q9Y243 479 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 FKTNO75072 461 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 ELNP15502 786 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 HOXC8P31273 242 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 CDK17Q00537 523 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 GNASQ5JWF2 1037 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 CYP26C1Q6V0L0 522 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 TSHZ1Q6ZSZ6 1077 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 ZNF410Q86VK4 478 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 PARD3BQ8TEW8 1205 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 MTG1Q9BT17 334 aaPredicted RBP15.35■□□□□ 0.05
SS18-201ENST00000269137 HAPLN2Q9GZV7 340 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 NUCKS1Q9H1E3 243 aaKnown RBP15.35■□□□□ 0.05
SS18-201ENST00000269137 GANQ9H2C0 597 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 PRMT7Q9NVM4 692 aaPredicted RBP15.35■□□□□ 0.05
SS18-201ENST00000269137 FBXL5Q9UKA1 691 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 PLAGL2Q9UPG8 496 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 USP20Q9Y2K6 914 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 PCNTO95613 3336 aa15.35■□□□□ 0.05
SS18-201ENST00000269137 SMIM35A0A1B0GVV1 85 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 MYADML2A6NDP7 307 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 INO80B-WBP1J3KQ70 363 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 CLDN3O15551 220 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 ZEB2O60315 1214 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 SLC9A1P19634 815 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 PROZP22891 400 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 GTF2H1P32780 548 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 DLG4P78352 724 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 CBWD6Q4V339 395 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 CBWD3Q5JTY5 395 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 CBWD5Q5RIA9 395 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 KLHDC7AQ5VTJ3 777 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 E4F1Q66K89 784 aaPredicted RBP15.34■□□□□ 0.05
SS18-201ENST00000269137 WDR59Q6PJI9 974 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 ZBTB45Q96K62 511 aaPredicted RBP15.34■□□□□ 0.05
SS18-201ENST00000269137 FAM213AQ9BRX8 229 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 MSTO1Q9BUK6 570 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 INO80BQ9C086 356 aaPredicted RBP15.34■□□□□ 0.05
SS18-201ENST00000269137 MINDY3Q9H8M7 445 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 ZNHIT6Q9NWK9 470 aaKnown RBP15.34■□□□□ 0.05
SS18-201ENST00000269137 GCNT4Q9P109 453 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 DAAM1Q9Y4D1 1078 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 SCN10AQ9Y5Y9 1956 aa15.34■□□□□ 0.05
SS18-201ENST00000269137 A0A087WZ62 844 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 TTLL13PA6NNM8 815 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 ABLIM1O14639 778 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 ADAMTS4O75173 837 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 VTNP04004 478 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 GNAT1P11488 350 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 CCND3P30281 292 aaPredicted RBP15.33■□□□□ 0.05
SS18-201ENST00000269137 GPC3P51654 580 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 PRMT2P55345 433 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 MYL7Q01449 175 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 PPP3CAQ08209 521 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 CETN1Q12798 172 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 PRPF4BQ13523 1007 aaKnown RBP15.33■□□□□ 0.05
SS18-201ENST00000269137 CRELD2Q6UXH1 353 aaPredicted RBP15.33■□□□□ 0.05
SS18-201ENST00000269137 CACNA2D4Q7Z3S7 1137 aa15.33■□□□□ 0.05
SS18-201ENST00000269137 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms