RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 OSGEPQ9NPF4 335 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 HDAC6Q9UBN7 1215 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 KIF3AQ9Y496 699 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 LPXNO60711 386 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 TADA3O75528 432 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 LDHCP07864 332 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 ALAS1P13196 640 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 ATP2B1P20020 1258 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 YWHABP31946 246 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 SYKP43405 635 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 CLCN3P51790 818 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 KRT85P78386 507 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 FMO1Q01740 532 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 WDR72Q3MJ13 1102 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 ZFP42Q96MM3 310 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 EURLQ9NYK6 297 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 RABGAP1Q9Y3P9 1069 aa6.27□□□□□ -1.41
TOPBP1-201ENST00000260810 DDHD2O94830 711 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 TCF7P36402 384 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 PRKCEQ02156 737 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 AP3B2Q13367 1082 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 RGMBQ6NW40 437 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 ACRBPQ8NEB7 543 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 ANKZF1Q9H8Y5 726 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 A0A1B0GUA9 196 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 C19orf81C9J6K1 198 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 FLT3P36888 993 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 GPC3P51654 580 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 TAZQ16635 292 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 LMBRD2Q68DH5 695 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 PPTC7Q8NI37 304 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CLEC4CQ8WTT0 213 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 TINF2Q9BSI4 451 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 MARCH5Q9NX47 278 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 NR2E3Q9Y5X4 410 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 ADGRG1Q9Y653 693 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 MROH7Q68CQ1 1323 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 UNCXA6NJT0 531 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 GCAP28676 217 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 ZNF165P49910 485 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 RNF207Q6ZRF8 634 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CABP7Q86V35 215 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 SERINC5Q86VE9 423 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 SH3TC2Q8TF17 1288 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 RHOBTB2Q9BYZ6 727 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 NACAP1Q9BZK3 213 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CYP26B1Q9NR63 512 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 IFNKQ9P0W0 207 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 PCDHA12Q9UN75 941 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 LCHNA4D1U4 455 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 B4DLN1 442 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 ZNF185O15231 689 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CALM1P0DP23 149 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CALM2P0DP24 149 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CALM3P0DP25 149 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 LMO2P25791 158 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 IL1R2P27930 398 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 TNNI2P48788 182 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 NT5C2P49902 561 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 RBM5P52756 815 aaKnown RBP eCLIP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 SPAG1Q07617 926 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 MTMR1Q13613 665 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CALCRLQ16602 461 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 GUF1Q8N442 669 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 DNERQ8NFT8 737 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 ZNF689Q96CS4 500 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 PPP1R10Q96QC0 940 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 ACO2Q99798 780 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 LRRC3Q9BY71 257 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CHD6Q8TD26 2715 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 PMM2O15305 246 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 XRCC5P13010 732 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CASP14P31944 242 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 FLT3LGP49771 235 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 IQCEQ6IPM2 695 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 OSTM1Q86WC4 334 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 ZNF280BQ86YH2 543 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 MFHAS1Q9Y4C4 1052 aa6.26□□□□□ -1.41
TOPBP1-201ENST00000260810 CCL15-CCL14A0A0B4J2E2 113 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 CA12O43570 354 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 CD160O95971 181 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 GSRP00390 522 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 PRKCGP05129 697 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 GTF2F1P35269 517 aaKnown RBP eCLIP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 FANCCQ00597 558 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 KLF1Q13351 362 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 CCL15Q16663 113 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 GAB4Q2WGN9 574 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 KLHDC7AQ5VTJ3 777 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 SWSAP1Q6NVH7 229 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 CUL5Q93034 780 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 ZNF333Q96JL9 665 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 DPEP3Q9H4B8 488 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 PKD2L1Q9P0L9 805 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 RWDD2AQ9UIY3 292 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 PTCH2Q9Y6C5 1203 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 TNFRSF10BO14763 440 aa6.25□□□□□ -1.41
TOPBP1-201ENST00000260810 GTPBP6O43824 516 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms