RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
UBE4B-201ENST00000253251 LTN1O94822 1766 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 CPP00450 1065 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 MYBP10242 640 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 TGFB3P10600 412 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 RASSF2P50749 326 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 ANKRD20A3Q5VUR7 823 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 SMC1BQ8NDV3 1235 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 C11orf70Q9BRQ4 267 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 FAM170AA1A519 330 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 CD4P01730 458 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 UCHL3P15374 230 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 RHOT1Q8IXI2 618 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 NUP85Q9BW27 656 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 DDX4Q9NQI0 724 aaKnown RBP16.02■□□□□ 0.16
UBE4B-201ENST00000253251 PARVAQ9NVD7 372 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 ADAMTSL3P82987 1691 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 INPP5BP32019 993 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 RGS2P41220 211 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 C4orf19Q8IY42 314 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 PDIK1LQ8N165 341 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
UBE4B-201ENST00000253251 ZNF677Q86XU0 584 aa16.02■□□□□ 0.15
UBE4B-201ENST00000253251 GBA2Q9HCG7 927 aaPredicted RBP16.02■□□□□ 0.15
UBE4B-201ENST00000253251 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
UBE4B-201ENST00000253251 M0QYV0 167 aa16.02■□□□□ 0.15
UBE4B-201ENST00000253251 NKRFO15226 690 aaKnown RBP eCLIP16.02■□□□□ 0.15
UBE4B-201ENST00000253251 IRX5P78411 483 aaPredicted RBP16.02■□□□□ 0.15
UBE4B-201ENST00000253251 USP50Q70EL3 339 aaPredicted RBP16.02■□□□□ 0.15
UBE4B-201ENST00000253251 SYTL5Q8TDW5 730 aaPredicted RBP16.02■□□□□ 0.15
UBE4B-201ENST00000253251 CAPS2Q9BXY5 557 aa16.02■□□□□ 0.15
UBE4B-201ENST00000253251 SLC38A7Q9NVC3 462 aa16.02■□□□□ 0.15
UBE4B-201ENST00000253251 DBR1Q9UK59 544 aaKnown RBP16.02■□□□□ 0.15
UBE4B-201ENST00000253251 PEAK1Q9H792 1746 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 MAPTP10636 758 aaKnown RBP16.01■□□□□ 0.15
UBE4B-201ENST00000253251 PSMC1P62191 440 aaKnown RBP16.01■□□□□ 0.15
UBE4B-201ENST00000253251 ZNF394Q53GI3 561 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 CENPUQ71F23 418 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 RASGRP2Q7LDG7 609 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 PLEKHH3Q7Z736 793 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 PDCD2LQ9BRP1 358 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 CNOT10Q9H9A5 744 aaKnown RBP16.01■□□□□ 0.15
UBE4B-201ENST00000253251 PFDN4Q9NQP4 134 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 CYP26B1Q9NR63 512 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 FAM187AA6NFU0 413 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 SUPT20HL2P0C7V6 817 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 ACTN1P12814 892 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 VEGFAP15692 232 aaPredicted RBP16.01■□□□□ 0.15
UBE4B-201ENST00000253251 CHRNA3P32297 505 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 GRIN1Q05586 938 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 DHX9Q08211 1270 aaKnown RBP16.01■□□□□ 0.15
UBE4B-201ENST00000253251 ANKRD42Q8N9B4 389 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 HPS3Q969F9 1004 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 SLITRK6Q9H5Y7 841 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 PXMP2Q9NR77 195 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 GNGT1P63211 74 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 SNX1Q13596 522 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 KLHL14Q9P2G3 628 aa16.01■□□□□ 0.15
UBE4B-201ENST00000253251 KPNA2P52292 529 aaKnown RBP16■□□□□ 0.15
UBE4B-201ENST00000253251 FCGRTP55899 365 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 GLYCTKQ8IVS8 523 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 BUD13Q9BRD0 619 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■□□ 17.7
UBE4B-201ENST00000253251 A8MXQ7 604 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 FOXP2O15409 715 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 GUCY2CP25092 1073 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 ASPHQ12797 758 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 TMEM132DQ14C87 1099 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 ATF7IP2Q5U623 682 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 OSBPL9Q96SU4 736 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 IL9RQ01113 521 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 PLA2G4FQ68DD2 849 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 CD302Q8IX05 232 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 PIN4Q9Y237 131 aaKnown RBP16■□□□□ 0.15
UBE4B-201ENST00000253251 ZFXP17010 805 aaPredicted RBP16■□□□□ 0.15
UBE4B-201ENST00000253251 GTF2H1P32780 548 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 NAMPTP43490 491 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 MNAT1P51948 309 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 PPATQ06203 517 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 NCOA4Q13772 614 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 TTC1Q99614 292 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 KLC2Q9H0B6 622 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 TBX20Q9UMR3 447 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 INPP5FQ9Y2H2 1132 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 CACNA1FO60840 1977 aa16■□□□□ 0.15
UBE4B-201ENST00000253251 UBE2Q2LH0YL09 131 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 RARBP10826 455 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 CACNA2D3Q8IZS8 1091 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 STMN2Q93045 179 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 MED24O75448 989 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 FGRP09769 529 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
UBE4B-201ENST00000253251 ZNF18P17022 549 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 NFKBIAP25963 317 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 TCF7P36402 384 aaPredicted RBP15.99■□□□□ 0.15
UBE4B-201ENST00000253251 MSH2P43246 934 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 ARPP19P56211 112 aa15.99■□□□□ 0.15
UBE4B-201ENST00000253251 DYNLT1P63172 113 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms